G690801 (LOC106571494)


Basic Information

Item Value
gene id G690801
gene name LOC106571494
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26384583 ~ 26385726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU786532
TTTTCTTTGGGGTGATGAAGGAAGTGGTGGGTGTTGGGAAAAGTAGTCTCCAGTGTTGAACCTAAGCATATATCCTGTTATGTGACTGTGACCTGTGCTTGAAGAGGGAGGCTCCTGTTCGGTGACCTTGGcaacgaCAGTGgttcctcctccctgtcctcaggTTTGGGCACCTCCAGTCTGTCTATGAAGCCCTGTAGCTCCTTCCTGAAGGCCTTCATCTGGGCATTGATCCTGTACAGCAGCTCATGCTCCCTgatcctcccaccctcctcctcctcctcaccccgcCCATACAGGTCGCTGTTGGAAACGTACACCCGTGCCTCTGCGATTATAGTTGCCGTGTCGGCGATGAGCCGATCGATGGTCCTGCCAAGACGCTCCGCCTCCACTCGAATGTCAATCATCTGCTGGCGATCCTGTAGGTTGCGGGGCAGGAAGCGGGCGGCGGTCTCAGGGGGTGGGGTATAGAGACCCCGGGTAGGCGTGAGGCAGCGGGTTTGGTTCCGCACCTCGTCCGAGTCACTCTCCCCGCCCACTGGGCCCTCGCGTTTGCGGTGCGGGGGCTGGaggcgagaggaggaggagtcatCATCGCTTTCGCGGCGCCCGCTTGGTCCGAGCCCTCCTGCGTCACTTTCTGCATCGCTGTCCCGAGGGCTGATGCCCCCCCTTAGGGCCAGGTGGGAGGCCAGGTCGTAGCGCTGCATGTTGGAGAGCAGAACACGCTTCTCATACTGCAGC

Function

NR:

description
protein SOGA3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU786532 True 747 lncRNA 0.60 2 26384583 26385726

Neighbor

gene id symbol gene type direction distance location
LOC110529703 LOC106571490 coding downstream 208944 26172446 ~ 26175639 (-)
LOC110531082 pgm3 coding downstream 262303 26120465 ~ 26122280 (-)
LOC110529700 LOC106571487 coding downstream 277782 26094941 ~ 26106801 (-)
LOC110529220 LOC106571486 coding downstream 289974 26087446 ~ 26094609 (-)
LOC110529219 NA coding downstream 366801 26006882 ~ 26017782 (-)
LOC110529708 LOC106571496 coding upstream 36769 26422495 ~ 26426074 (-)
cenpw LOC106571497 coding upstream 43314 26428702 ~ 26430888 (-)
LOC110529710 LOC106571501 coding upstream 58391 26444117 ~ 26463361 (-)
LOC110529713 l3hypdh coding upstream 205804 26591530 ~ 26596738 (-)
LOC110529714 LOC106571503 coding upstream 213304 26599030 ~ 26602934 (-)
G690783 NA non-coding downstream 23268 26361027 ~ 26361315 (-)
G690780 NA non-coding downstream 28031 26356322 ~ 26356552 (-)
G690776 NA non-coding downstream 31844 26352414 ~ 26352739 (-)
G690705 NA non-coding downstream 58148 26264914 ~ 26326435 (-)
G690700 NA non-coding downstream 127962 26256081 ~ 26256621 (-)
G691008 NA non-coding upstream 329491 26715217 ~ 26715507 (-)
G691010 NA non-coding upstream 333918 26719644 ~ 26719843 (-)
G691038 NA non-coding upstream 372414 26758140 ~ 26766768 (-)
G691054 NA non-coding upstream 408683 26794409 ~ 26794617 (-)
G690073 NA other downstream 393440 25990678 ~ 25991143 (-)
G690033 NA other downstream 419090 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 579108 25801320 ~ 25805570 (-)
G689810 LOC106571475 other downstream 719918 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 863295 25517566 ~ 25521288 (-)
G691447 LOC106571509 other upstream 478484 26864210 ~ 26868078 (-)
G691747 NA other upstream 929842 27315568 ~ 27315935 (-)
G692859 NA other upstream 1730010 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 2093091 28478817 ~ 28481944 (-)

Expression


Co-expression Network