XLOC_002612


Basic Information

Item Value
gene id XLOC_002612
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 9145508 ~ 9146642 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006001
CAGCAGGACATGTCTGCGattgcaaccggtctttttttgcaaccagtaTTCGCTAttgaacccgtgtgacgtcatgtgtgacaaagGTATTACATAAAGTCTTCAACAGCGAGCTCTTTGCTTTTCACTCGCCTTTGAAATCTCATCCTCTCATCAAGACAAACAGTCTGCTAACCTTATGTGGGCCTCAATCACAGAAGCTAAGAGAGCGTCTACCGCAGAGCGCTCCTGCCAGCCAAATcaccacaaaaacaaacaacctCCTGAGATGAACACAAGAAAAACAGCAAATGACCTCACATGTTATAAAGCGGCGAAATTTCCTTTTTGCTTGTCCAGCCTCAGCACTTGATGTCCGCTATACTATTGGCTAATGCTAATGGCTTTGTTATGGCAATGTGCTACTTCATTAATGGACATTTGTGCTGATAAAGGTGCGTTAGCTTTTCCTGGTGAGAGTCTCTGCGTGTGTTTGGGGCTCTGTATGTTTTTGAAAAGGCTTGTTAAAAGCAGCCCGCCTTGAGAGGTGGAAATGGGGCCAAAGTGGTAAACACAGCTGTGGTAGACCTCTATTGTCTAAGCCGCCCAGAAAATAGACTAAGAAATCACAAACACTGGACATCAAATGGAGTGTCAGCTTAATCCAGGATAATACTagttatggtaaaaaaaaaacactgcaaagtttctagaAAATAGGATGTTGGATGTGTTTCAGGAAGTGCGGTTTACAGGTGGTGGTTATCATAATGTGGCATTTGTTCCTGGTGTGGTTGTCAAACGCTCCCTTCCTGTCTTCCCTTTCTGTTTTCTGCTTTCCTAAAGTCTGCCTGGTTCTCGATCTAGGAAGACCTCGGGCATCAATCAGCATATGACCTGATTTTAGATgacaaaagac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006001 True 898 lncRNA 0.44 2 9145508 9146642

Neighbor

gene id symbol gene type direction distance location
XLOC_002611 BX323017.1 coding downstream 3829 9141565 ~ 9141679 (-)
XLOC_002610 si:dkeyp-41f9.3 coding downstream 30125 9105007 ~ 9115383 (-)
XLOC_002608 arl15b coding downstream 55872 9006574 ~ 9089636 (-)
XLOC_002609 CU694950.1 coding downstream 128671 9016721 ~ 9016837 (-)
XLOC_002607 mocs2 coding downstream 188028 8947228 ~ 8957480 (-)
XLOC_002613 si:dkeyp-41f9.4 coding upstream 40009 9186651 ~ 9192450 (-)
XLOC_002614 anxa3b coding upstream 100951 9247593 ~ 9269733 (-)
XLOC_002615 NA coding upstream 119411 9266053 ~ 9267711 (-)
XLOC_002616 mrrf coding upstream 158408 9305050 ~ 9346360 (-)
XLOC_002617 morn5 coding upstream 250663 9397305 ~ 9410068 (-)
XLOC_002606 NA non-coding downstream 286940 8841698 ~ 8858568 (-)
XLOC_002605 BX571955.1 non-coding downstream 467680 8675890 ~ 8677828 (-)
XLOC_002603 NA non-coding downstream 487831 8638921 ~ 8657677 (-)
XLOC_002618 BX248511.1 non-coding upstream 387973 9534615 ~ 9538335 (-)
XLOC_002619 NA non-coding upstream 499720 9646362 ~ 9661692 (-)
XLOC_002621 NA non-coding upstream 1114703 10261345 ~ 10288683 (-)
XLOC_002622 NA non-coding upstream 1127087 10273729 ~ 10278533 (-)

Expression


Co-expression Network