G691479


Basic Information

Item Value
gene id G691479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26908013 ~ 26909893 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU787265
gcaTAAacttcccacccgagtcacaccctacCCTAACAAACATAGAgaaaaaaggatctctaaggtcagggcgtgacaatggaGACATGACTATTTAAAAAAATCCCTAATTTTGTCGAGATCACAACTTATTTATCTCATGATCAAGACAGAACAAACGTTTTTTTCACGAGATAAACTGTATAAATAGGAGTGGAGGCATTGATGATACATtgacagtatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcataaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaacaattgggcgtgcaaaattattcagcccccttaaattaatactttgtagcgccaccttttgctgcgattacagctgtaattcgcttggggtatgtctctatcagttttgcacatcgagagactgaaatttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttattttttaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctctgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatagattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttccattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaattacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgaatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagttggaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaataatttcgcaaggcactgtagctgagaGCCCACAGTGGATGAGCACATATGTTTTT

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU787265 True 1881 lncRNA 0.41 1 26908013 26909893

Neighbor

gene id symbol gene type direction distance location
LOC110529714 LOC106571503 coding downstream 305079 26599030 ~ 26602934 (-)
LOC110529713 l3hypdh coding downstream 311275 26591530 ~ 26596738 (-)
LOC110529710 LOC106571501 coding downstream 444652 26444117 ~ 26463361 (-)
cenpw LOC106571497 coding downstream 477125 26428702 ~ 26430888 (-)
LOC110529708 LOC106571496 coding downstream 481939 26422495 ~ 26426074 (-)
LOC110529723 NA coding upstream 261045 27170938 ~ 27186859 (-)
esr2a erb1 coding upstream 334666 27244559 ~ 27284491 (-)
LOC110529724 NA coding upstream 377222 27287115 ~ 27308032 (-)
LOC110529221 NA coding upstream 705107 27615000 ~ 27616094 (-)
brf1b LOC106571710 coding upstream 914257 27824150 ~ 27951450 (-)
G691473 NA non-coding downstream 5327 26902457 ~ 26902686 (-)
G691471 NA non-coding downstream 8624 26899142 ~ 26899389 (-)
G691469 NA non-coding downstream 11254 26896533 ~ 26896759 (-)
G691466 NA non-coding downstream 16484 26889894 ~ 26891529 (-)
G691465 NA non-coding downstream 20271 26887436 ~ 26887742 (-)
G691505 NA non-coding upstream 40824 26950717 ~ 26952546 (-)
G691520 NA non-coding upstream 85390 26995283 ~ 26997833 (-)
G691671 NA non-coding upstream 269291 27179184 ~ 27214300 (-)
G691742 NA non-coding upstream 387750 27297643 ~ 27298144 (-)
G691749 NA non-coding upstream 409520 27319413 ~ 27319655 (-)
G691447 LOC106571509 other downstream 39935 26864210 ~ 26868078 (-)
G690073 NA other downstream 916870 25990678 ~ 25991143 (-)
G690033 NA other downstream 942520 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 1102538 25801320 ~ 25805570 (-)
G691747 NA other upstream 405675 27315568 ~ 27315935 (-)
G692859 NA other upstream 1205843 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 1568924 28478817 ~ 28481944 (-)
G693383 btbd7 other upstream 1683448 28593341 ~ 28594431 (-)
G693665 NA other upstream 2048502 28958395 ~ 28958832 (-)

Expression


Co-expression Network