G691278


Basic Information

Item Value
gene id G691278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 27287488 ~ 27287996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU787057
GACAATATATTGACAATTTTATTACAAAAGTGCCAGactgttgtaaaagtgttacacaaCTTTAGACATACTATGCTGAGTTAAGTAATGTATTTCTACCAAAAATGCTAACATTAACGTTTATTGGCAGTGACTTATCTCCCGAAACCAAATTGTTTAACAACAcagggtgagacccagatgcagacacaggaggcagatagttagagtctctgatatttattagaatacaaggggcaggcaataggCAGGTCGAGAACAGGCAGAAGTTCattaaccaggtcagagtccaagaGGTACAGGGGGCAGGCAGGCtagaggtcagggcaggctgaatggtcaggaaGGCGtgctcagtgtcagggcaggcagaacaggTCAGAACCGGGAGGGCTAGAAAACAGAGACTAGGAAAAACAGGAGCACGGAAAAACACattgacaagacaagacgaattggcaacagacaaacagagagcacagtattaaatacactggggataatgggga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611878 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU787057 True 509 lncRNA 0.44 1 27287488 27287996

Neighbor

gene id symbol gene type direction distance location
LOC110529722 LOC106571714 coding upstream 43310 27011159 ~ 27244178 (+)
ppp1r13bb ppp1r13b coding upstream 289645 26916669 ~ 26997843 (+)
atp5mpl cssa15h14orf2 coding upstream 395956 26889795 ~ 26891532 (+)
si:ch211-212g7.6 LOC106571509 coding upstream 419372 26845680 ~ 26868116 (+)
LOC110529717 LOC106571508 coding upstream 452083 26799590 ~ 26835405 (+)
nudt14 LOC106571713 coding downstream 103721 27391717 ~ 27483687 (+)
jag2b LOC106571712 coding downstream 210165 27498161 ~ 27602164 (+)
btbd6b LOC106571711 coding downstream 621709 27909705 ~ 27914563 (+)
LOC110529728 LOC106571709 coding downstream 643505 27931501 ~ 27948051 (+)
xrcc3 xrcc3 coding downstream 663639 27951635 ~ 27972016 (+)
G691122 NA non-coding upstream 378007 26909081 ~ 26909481 (+)
G691119 NA non-coding upstream 384606 26902625 ~ 26902882 (+)
G691116 NA non-coding upstream 389638 26897620 ~ 26897850 (+)
G691113 NA non-coding upstream 391786 26895450 ~ 26895702 (+)
G691279 NA non-coding downstream 292 27288288 ~ 27288515 (+)
G691280 NA non-coding downstream 1121 27289117 ~ 27289321 (+)
G691281 NA non-coding downstream 1474 27289470 ~ 27289848 (+)
G691284 NA non-coding downstream 4213 27292209 ~ 27292609 (+)
G691288 NA non-coding downstream 8894 27296890 ~ 27297154 (+)
LOC110529706 LOC106571495 other upstream 904062 26381097 ~ 26393547 (+)
LOC110529702 LOC106607944 other upstream 1091944 26133191 ~ 26195544 (+)
LOC110529690 LOC106571476 other upstream 1605761 25678604 ~ 25685894 (+)
G688823 NA other upstream 2226038 25058953 ~ 25061450 (+)
G688613 NA other upstream 2302662 24982729 ~ 24984826 (+)
G692343 LOC106571710 other downstream 607705 27895701 ~ 27895987 (+)
G692424 NA other downstream 781904 28069900 ~ 28070228 (+)
btbd7 btbd7 other downstream 1207289 28495104 ~ 28605625 (+)

Expression


Co-expression Network