G692687


Basic Information

Item Value
gene id G692687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 27800216 ~ 27844826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU788550
ataagagacggattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcgtgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcctttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttc
>TU788547
gttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcctttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU788550 False 346 lncRNA 0.42 2 27800216 27804885
TU788547 True 205 lncRNA 0.42 2 27809298 27844826

Neighbor

gene id symbol gene type direction distance location
LOC110529221 NA coding downstream 184122 27615000 ~ 27616094 (-)
LOC110529724 NA coding downstream 492184 27287115 ~ 27308032 (-)
esr2a erb1 coding downstream 515725 27244559 ~ 27284491 (-)
LOC110529723 NA coding downstream 613357 27170938 ~ 27186859 (-)
LOC110529714 LOC106571503 coding downstream 1197282 26599030 ~ 26602934 (-)
LOC110529732 LOC106571705 coding upstream 166971 28011797 ~ 28023925 (-)
ppp4r4 ppp4r4 coding upstream 205333 28050159 ~ 28177674 (-)
prima1 prima1 coding upstream 482110 28326936 ~ 28388304 (-)
si:dkey-85n7.8 NA coding upstream 633991 28478817 ~ 28481944 (-)
ubr7 ubr7 coding upstream 761445 28606271 ~ 28624188 (-)
G692169 NA non-coding downstream 78013 27717179 ~ 27722203 (-)
G692153 NA non-coding downstream 114506 27685318 ~ 27685710 (-)
G692087 NA non-coding downstream 149609 27650387 ~ 27650607 (-)
G692069 NA non-coding downstream 160442 27639575 ~ 27639774 (-)
G691826 LOC106571713 non-coding downstream 316547 27477780 ~ 27483669 (-)
G692722 NA non-coding upstream 5684 27850510 ~ 27850751 (-)
G692725 NA non-coding upstream 10567 27855393 ~ 27855651 (-)
G692769 LOC106571703 non-coding upstream 187577 28032403 ~ 28036080 (-)
G692832 NA non-coding upstream 227162 28071988 ~ 28105978 (-)
G692856 NA non-coding upstream 265739 28110565 ~ 28110782 (-)
G691747 NA other downstream 484281 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 932138 26864210 ~ 26868078 (-)
cenpw LOC106571497 other downstream 1369373 26428702 ~ 26430888 (-)
G690073 NA other downstream 1809073 25990678 ~ 25991143 (-)
G690033 NA other downstream 1834723 25965179 ~ 25965493 (-)
G692859 NA other upstream 270910 28115736 ~ 28116048 (-)
G693383 btbd7 other upstream 748515 28593341 ~ 28594431 (-)
G693665 NA other upstream 1113569 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 2156937 30001763 ~ 30062168 (-)

Expression


Co-expression Network