G692422


Basic Information

Item Value
gene id G692422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28069008 ~ 28069294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU788259
GCCATTTGCTTAGCAAATCTATCATGGCACAGGTTGTACTGGCACCTGTGACAACACTTTTTCCGTATAGATGTCtgcattgtattgtttatttttgtCAACCTTGTCGGCAAACAAAATAGATAGatgtatagacagacagagacactagacagacagacttattgacagacagacagacacacaccttgCAGCACTTTGCCGATGATCTCTTGCCGCTGCTCCTGCTTGCGGTTGTAGCGTAGGAACATACACAGCGTCCTGGCCGCCTCTCTCTGGACTGGGAG

Function

NR:

description
serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU788259 True 287 lncRNA 0.47 1 28069008 28069294

Neighbor

gene id symbol gene type direction distance location
serpina10a LOC106571703 coding upstream 18574 28032401 ~ 28050434 (+)
LOC110529731 klc1 coding upstream 68102 27976743 ~ 28000906 (+)
xrcc3 xrcc3 coding upstream 98178 27951635 ~ 27972016 (+)
LOC110529728 LOC106571709 coding upstream 120957 27931501 ~ 27948051 (+)
btbd6b LOC106571711 coding upstream 154445 27909705 ~ 27914563 (+)
asb2a.2 LOC106571697 coding downstream 146906 28216200 ~ 28224790 (+)
LOC110529736 LOC106571696 coding downstream 167359 28236653 ~ 28266785 (+)
LOC110529737 NA coding downstream 212956 28282250 ~ 28295030 (+)
LOC110529738 LOC106571695 coding downstream 232074 28301368 ~ 28314736 (+)
btbd7 btbd7 coding downstream 425810 28495104 ~ 28605625 (+)
G692381 ppp4r4 non-coding upstream 79 27998056 ~ 28068929 (+)
G692333 NA non-coding upstream 95164 27972525 ~ 27973844 (+)
G692367 NA non-coding upstream 139536 27929266 ~ 27929472 (+)
G692364 NA non-coding upstream 143994 27924786 ~ 27925014 (+)
G692464 NA non-coding downstream 53283 28122577 ~ 28123405 (+)
G692465 NA non-coding downstream 54234 28123528 ~ 28123934 (+)
G692480 NA non-coding downstream 81545 28150839 ~ 28151041 (+)
G692486 NA non-coding downstream 86673 28155967 ~ 28156190 (+)
G692343 LOC106571710 other upstream 173021 27895701 ~ 27895987 (+)
jag2b LOC106571712 other upstream 511989 27498161 ~ 27602164 (+)
LOC110529706 LOC106571495 other upstream 1685582 26381097 ~ 26393547 (+)
LOC110529702 LOC106607944 other upstream 1873464 26133191 ~ 26195544 (+)
G692424 NA other downstream 606 28069900 ~ 28070228 (+)
G693207 NA other downstream 635556 28704850 ~ 28705752 (+)
cdca4 LOC106571684 other downstream 861466 28930668 ~ 28939888 (+)
G694036 NA other downstream 1721703 29790997 ~ 29792747 (+)

Expression


Co-expression Network