Gene
RNA
| Item | Value |
|---|---|
| gene id | G693206 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 28712411 ~ 28718652 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| chromogranin-A isoform X3 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU789100 | True | 654 | lncRNA | 0.56 | 2 | 28712411 | 28718652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| itpk1a | itpk1 | coding | upstream | 15687 | 28633084 ~ 28696724 (+) |
| si:dkeyp-55f12.3 | NA | coding | upstream | 86801 | 28623534 ~ 28625610 (+) |
| btbd7 | btbd7 | coding | upstream | 106786 | 28495104 ~ 28605625 (+) |
| LOC110529738 | LOC106571695 | coding | upstream | 397675 | 28301368 ~ 28314736 (+) |
| LOC110529737 | NA | coding | upstream | 429307 | 28282250 ~ 28295030 (+) |
| LOC110531084 | LOC106571688 | coding | downstream | 86078 | 28804730 ~ 28806416 (+) |
| LOC110529749 | NA | coding | downstream | 91091 | 28809743 ~ 28814043 (+) |
| LOC110529751 | NA | coding | downstream | 97139 | 28815791 ~ 28825392 (+) |
| vipas39 | vipas39 | coding | downstream | 142007 | 28860659 ~ 28881460 (+) |
| LOC110529754 | gp132 | coding | downstream | 170667 | 28889319 ~ 28916134 (+) |
| G693082 | NA | non-coding | upstream | 247574 | 28464301 ~ 28464837 (+) |
| G692608 | NA | non-coding | upstream | 365336 | 28346780 ~ 28347075 (+) |
| G692486 | NA | non-coding | upstream | 556221 | 28155967 ~ 28156190 (+) |
| G692480 | NA | non-coding | upstream | 561370 | 28150839 ~ 28151041 (+) |
| G693216 | NA | non-coding | downstream | 8488 | 28727140 ~ 28735356 (+) |
| G693256 | NA | non-coding | downstream | 61954 | 28780606 ~ 28780882 (+) |
| G693262 | NA | non-coding | downstream | 72611 | 28791263 ~ 28791470 (+) |
| G693263 | NA | non-coding | downstream | 73281 | 28791933 ~ 28792236 (+) |
| G693266 | NA | non-coding | downstream | 75783 | 28794435 ~ 28794650 (+) |
| G693207 | NA | other | upstream | 6659 | 28704850 ~ 28705752 (+) |
| G692424 | NA | other | upstream | 642183 | 28069900 ~ 28070228 (+) |
| xrcc3 | xrcc3 | other | upstream | 740395 | 27951635 ~ 27972016 (+) |
| G692343 | LOC106571710 | other | upstream | 816424 | 27895701 ~ 27895987 (+) |
| cdca4 | LOC106571684 | other | downstream | 212108 | 28930668 ~ 28939888 (+) |
| G694036 | NA | other | downstream | 1072345 | 29790997 ~ 29792747 (+) |
| G699605 | NA | other | downstream | 5408941 | 34127593 ~ 34128301 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 6736196 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 6894512 | 35613164 ~ 35614666 (+) |
