G693216


Basic Information

Item Value
gene id G693216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28727140 ~ 28735356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU789111
CATTAAGCTATTCGTTGAAAATGATTCTTACCTCGACATCCTCTTTCTCAAGgaccggagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggacgtgctgctgctcctgtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU789111 True 229 lncRNA 0.46 2 28727140 28735356

Neighbor

gene id symbol gene type direction distance location
itpk1a itpk1 coding upstream 30416 28633084 ~ 28696724 (+)
si:dkeyp-55f12.3 NA coding upstream 101530 28623534 ~ 28625610 (+)
btbd7 btbd7 coding upstream 121515 28495104 ~ 28605625 (+)
LOC110529738 LOC106571695 coding upstream 412404 28301368 ~ 28314736 (+)
LOC110529737 NA coding upstream 444036 28282250 ~ 28295030 (+)
LOC110531084 LOC106571688 coding downstream 69374 28804730 ~ 28806416 (+)
LOC110529749 NA coding downstream 74387 28809743 ~ 28814043 (+)
LOC110529751 NA coding downstream 80435 28815791 ~ 28825392 (+)
vipas39 vipas39 coding downstream 125303 28860659 ~ 28881460 (+)
LOC110529754 gp132 coding downstream 153963 28889319 ~ 28916134 (+)
G693206 NA non-coding upstream 8488 28712411 ~ 28718652 (+)
G693082 NA non-coding upstream 262303 28464301 ~ 28464837 (+)
G692608 NA non-coding upstream 380065 28346780 ~ 28347075 (+)
G692486 NA non-coding upstream 570950 28155967 ~ 28156190 (+)
G693256 NA non-coding downstream 45250 28780606 ~ 28780882 (+)
G693262 NA non-coding downstream 55907 28791263 ~ 28791470 (+)
G693263 NA non-coding downstream 56577 28791933 ~ 28792236 (+)
G693266 NA non-coding downstream 59079 28794435 ~ 28794650 (+)
G693270 NA non-coding downstream 61948 28797304 ~ 28797556 (+)
G693207 NA other upstream 21388 28704850 ~ 28705752 (+)
G692424 NA other upstream 656912 28069900 ~ 28070228 (+)
xrcc3 xrcc3 other upstream 755124 27951635 ~ 27972016 (+)
G692343 LOC106571710 other upstream 831153 27895701 ~ 27895987 (+)
cdca4 LOC106571684 other downstream 195404 28930668 ~ 28939888 (+)
G694036 NA other downstream 1055641 29790997 ~ 29792747 (+)
G699605 NA other downstream 5392237 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 6719492 35454437 ~ 35462086 (+)
G700685 NA other downstream 6877808 35613164 ~ 35614666 (+)

Expression


Co-expression Network