G693256


Basic Information

Item Value
gene id G693256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28780606 ~ 28780882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU789160
aaataaaaaccGTATTTATATAAGtgttcagatcctttgctatgagactcgaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctccaacttgattggagtccacctgtggtaaattcagttgattgaacatgatttggaaaggcacacaactgtctatataaggtcccacagttgacagtgcgtgtcagagcaaaagccaagccacgaggtcaaaggaattgtccatagatctcagagacaggattgtgtcaaggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU789160 True 277 lncRNA 0.42 1 28780606 28780882

Neighbor

gene id symbol gene type direction distance location
itpk1a itpk1 coding upstream 83882 28633084 ~ 28696724 (+)
si:dkeyp-55f12.3 NA coding upstream 154996 28623534 ~ 28625610 (+)
btbd7 btbd7 coding upstream 174981 28495104 ~ 28605625 (+)
LOC110529738 LOC106571695 coding upstream 465870 28301368 ~ 28314736 (+)
LOC110529737 NA coding upstream 497502 28282250 ~ 28295030 (+)
LOC110531084 LOC106571688 coding downstream 23848 28804730 ~ 28806416 (+)
LOC110529749 NA coding downstream 28861 28809743 ~ 28814043 (+)
LOC110529751 NA coding downstream 34909 28815791 ~ 28825392 (+)
vipas39 vipas39 coding downstream 79777 28860659 ~ 28881460 (+)
LOC110529754 gp132 coding downstream 108437 28889319 ~ 28916134 (+)
G693216 NA non-coding upstream 45250 28727140 ~ 28735356 (+)
G693206 NA non-coding upstream 61954 28712411 ~ 28718652 (+)
G693082 NA non-coding upstream 315769 28464301 ~ 28464837 (+)
G692608 NA non-coding upstream 433531 28346780 ~ 28347075 (+)
G693262 NA non-coding downstream 10381 28791263 ~ 28791470 (+)
G693263 NA non-coding downstream 11051 28791933 ~ 28792236 (+)
G693266 NA non-coding downstream 13553 28794435 ~ 28794650 (+)
G693270 NA non-coding downstream 16422 28797304 ~ 28797556 (+)
G693271 NA non-coding downstream 17157 28798039 ~ 28798247 (+)
G693207 NA other upstream 74854 28704850 ~ 28705752 (+)
G692424 NA other upstream 710378 28069900 ~ 28070228 (+)
xrcc3 xrcc3 other upstream 808590 27951635 ~ 27972016 (+)
G692343 LOC106571710 other upstream 884619 27895701 ~ 27895987 (+)
cdca4 LOC106571684 other downstream 149878 28930668 ~ 28939888 (+)
G694036 NA other downstream 1010115 29790997 ~ 29792747 (+)
G699605 NA other downstream 5346711 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 6673966 35454437 ~ 35462086 (+)
G700685 NA other downstream 6832282 35613164 ~ 35614666 (+)

Expression


Co-expression Network