XLOC_026130


Basic Information

Item Value
gene id XLOC_026130
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10018357 ~ 10025630 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052436
CAGAAGAGCCTTCATCTCACTCTAAAACAATGGAGCTCTACATTTACTGTGCACTTTTTAAAAGGAGGATTAAAGGCAGAGTTATAAAACTCTCACGCAGATGATGAGAGGTGCTGCGGTTCATGACACGGAGGACGGCGCTGACCAAAACATCTTTGGGTCACAACAAAAGCATTGCAGATTGAAGGACGTGTGGAGCTTTTCAAATAAACCCCGTGGATGTATGCAGTGAACTGGAAACGTGGCGACAAAACATTAGCAGTCTGACAACCAACCGCCGACGCGCATCAAAAGTTTCcgaaagaaaaaacaaagaacGAGACACGTCTTTTCAAGCTGCGCCACATCAACACACTTGAGATCCAGCACTGACAGCATGACTTTGAGCAAAggtcactttttaaaagtttttctgAGAGATTTCAGCAAAGCTCGCTTTTTCTGCCCCCCCCCAGAGGAAACCCCAGAGGCTGGCGGAGTGTCGGGGTGAGGATACGCCCCAGTGCTTTATATTAATGGTGACTTTGGAGCTCGTAACGCTGAATCTCAGGGTTACAGCCCCCCGGGCGCCCACTGAGCGGAATACCGAAAGAGAGATGGGAGCGCGCGCGAGATATCGAGGCGGTAAAAAATCCATTTCCCACCACCGCCCGCCCTTGCTGGTCACCAGGGTCCCTCTCGCTCTCTCCCGCTCAAGaGAGGGCACCTTTATTCATCGGCAGGTTGCCATGACGCCCGCTGGGAGAAAAAGCGCGCACGCGGTGATCAAGGGCTCGAGCGGCCCGCGCCCGTGCAGAGGGCACCATTCATTAAACGCCGCACTCTTCGTTATGGAGCTCCGTTATCACTTCCATGACATTAACTGGAGGAACGTCCTGCCGATATATCCTGCAGCACCGGCGATTCGCTTTGAAAAATGGTTACGTTTCATGTGGCTTTTAAAGTAAAGTTTCACTTtagtgaaagagagaaagagggaaCACGTCAACTTTGGgctattgttgtttatttgttgttgttttttttgtaataaaaaagctttatcatttgaaaaaaaaatcttatactattatattatattatattatattatattaggctATATTATATTAGGCTATAATATTATATTCATTTCTTATACTGTTTTTAATTAAGCATATCGAGTTGAGGATCATCATGTAATGTTAAAGTCAGCTTCAAATCaaattttacaatgtttattttgcttgctCACATTGTTATTCATTAGGCGAATCAACTGAAAAacgggtttgttttggtcatcTTCAATGacagtctgaccatttgctttgtTGTTTGGAGAAGTAGTTTGTGTCAACATCATTACCCTCTCACTATTATCTTGAGTGTTATCTTTGGTTTCCATGAATGTGAAAAGAAAACAATACTTATTTAATAAACCTAATTTTTTTGTTGGCCAAATTTCATATTTACAAGAGCAAGTTTTGTAAGTGTAAACCTTTTTTTCctaaatttaaaattgaaatgaaaatgtattttgagtGAATTGAGGGATCAACAAACTTAATAGCAATACGAACAAGGACTTTGATGAAGAACCTGGCACTTATATTGGACTAAATGGCTGAAACCCCCTGCATTGTTGTTATTTGATTGATGATTGATTCATTTGTTGTTAATGTTTTTCaagcattcaaaaaaaaaaaaaaaaaaaaactattagatTGAGATTTATAGGAAATGATGTGCAAAAGAATGccctgccccc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052436 True 1750 lncRNA 0.41 4 10018357 10025630

Neighbor

gene id symbol gene type direction distance location
XLOC_026129 NA coding downstream 3782 9984415 ~ 10014575 (-)
XLOC_026128 FP236320.1 coding downstream 103968 9914272 ~ 9914389 (-)
XLOC_026127 NA coding downstream 118928 9896216 ~ 9899429 (-)
XLOC_026126 CR339059.4 coding downstream 256819 9754014 ~ 9761538 (-)
XLOC_026125 CR339059.3 coding downstream 265506 9744455 ~ 9752851 (-)
XLOC_026131 NA coding upstream 35342 10060972 ~ 10134755 (-)
XLOC_026132 NA coding upstream 36558 10062188 ~ 10137141 (-)
XLOC_026133 BX539325.2 coding upstream 153561 10179191 ~ 10186353 (-)
XLOC_026134 BX539325.3 coding upstream 161403 10187033 ~ 10187151 (-)
XLOC_026135 BX539325.1 coding upstream 187468 10213098 ~ 10213220 (-)

Expression


Co-expression Network