XLOC_026131


Basic Information

Item Value
gene id XLOC_026131
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10060972 ~ 10134755 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052948
TTCTAAAAGGCAATCTTGTATTGCACCTCTGAGTTCCTCAGATACATCTGACTGATTTCTGTATTTCAAAccaattttgaatttttttctctctaaCTCAAATATATTAGAATCATCCTCGGTAAAAAGGCAGATGAGTGGCTTTGTGTTTGTGAACAGGTTTTGGATTATTGCTGCACTTCTGTCATTGCTGTCCAGTTGTGGCAGTAGAACCACATTGACTGAGGCCATTTCTGTGAGGGTCTTCATCTGTTTCTCATGTTCTCCTGCATCTCCATGTAGATTACAGAAGGCCACACAGTTATTGAATTTATCAGTGTCTTTTCCAGAAGGACAGAACCAGGCGATCTCCACCACTCCATTCATTAGGACTTTGGATCTGCTGCTGCCTGGGCAGTTCCTGTGGAAGAATGTGTTGTGTCTGTCATTGATCAGGCTGTTAATCAGATGAGACTTGGATGAAGACACTGAGCCAAACCTGAAGAAAAACACCATTGGAGTTTTTGCCTTATAGATTGGCTGAGTTTGACTGATGGTTTCATTGTTGATGTTTCTGATCTTCCAGCTCTTGGTGATTTGTCTAAATGTCCAGAGTGGAAACTCAATCTGCTGTGTGAACGGATCAGGAACAAGCAGAGGCAGAGCATACTGACACTGGGACAGTTTAGTGACCATCATCTGCTTTAGGAAACCATCAGCACAGTGAAACACAGCCATCTGAACATCCATTGGATCGATTCGCTCAGACTGACCGGCAACCATGTTAGATAAAGACATTGCTTTGAATATATCACCACCGTGCATGGATGAGCCAGTGtctattttcttttgtttggtCTCTTTAACTTGAATGTATCTTGCTCTGTAGTCCATCATGAGTAGTTTTAGTATGAACATTTGAACCAGCTCATCTTCAGCACATGACTCAAGAGTCTGTAATGTATGTTTTGTTATCTGAAGAACATCAGCAGCTCTCAGCTGGTCATTTCTGTTTAGGTGAATTCTTtgaaacagtttttgtttttgttcagtcTTTTCCTGTTGTTTGCGTTGATCTGTTCCAATATCTGCTCCTGCAATGTTCTTGGTTTCTCTCTGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052948 True 1099 lncRNA 0.41 2 10060972 10134755

Neighbor

gene id symbol gene type direction distance location
XLOC_026130 NA coding downstream 35342 10018357 ~ 10025630 (-)
XLOC_026129 NA coding downstream 46397 9984415 ~ 10014575 (-)
XLOC_026128 FP236320.1 coding downstream 146583 9914272 ~ 9914389 (-)
XLOC_026127 NA coding downstream 161543 9896216 ~ 9899429 (-)
XLOC_026126 CR339059.4 coding downstream 299434 9754014 ~ 9761538 (-)
XLOC_026133 BX539325.2 coding upstream 44436 10179191 ~ 10186353 (-)
XLOC_026134 BX539325.3 coding upstream 52278 10187033 ~ 10187151 (-)
XLOC_026135 BX539325.1 coding upstream 78343 10213098 ~ 10213220 (-)
XLOC_026136 NA coding upstream 117404 10252159 ~ 10393828 (-)
XLOC_026137 nog1 coding upstream 175335 10310090 ~ 10312252 (-)
XLOC_026139 NA non-coding upstream 388695 10523450 ~ 10529896 (-)

Expression


Co-expression Network