Gene
RNA
| Item | Value |
|---|---|
| gene id | G693618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 29058386 ~ 29058604 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU789580 | True | 219 | lncRNA | 0.57 | 1 | 29058386 | 29058604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-177p2.6 | LOC106571683 | coding | upstream | 90638 | 28951530 ~ 28967748 (+) |
| cdca4 | LOC106571684 | coding | upstream | 118498 | 28930668 ~ 28939888 (+) |
| LOC110529754 | gp132 | coding | upstream | 142252 | 28889319 ~ 28916134 (+) |
| vipas39 | vipas39 | coding | upstream | 176926 | 28860659 ~ 28881460 (+) |
| LOC110529751 | NA | coding | upstream | 235409 | 28815791 ~ 28825392 (+) |
| LOC110529758 | LOC106571678 | coding | downstream | 282300 | 29340904 ~ 29867575 (+) |
| LOC110529762 | LOC100136382 | coding | downstream | 880505 | 29939109 ~ 29970121 (+) |
| LOC110529765 | LOC106571674 | coding | downstream | 1091384 | 30149988 ~ 30158324 (+) |
| LOC110529766 | LOC107589657 | coding | downstream | 1109517 | 30168121 ~ 30173329 (+) |
| LOC110529767 | LOC107396020 | coding | downstream | 1117135 | 30175739 ~ 30190971 (+) |
| G693617 | NA | non-coding | upstream | 926 | 29057234 ~ 29057460 (+) |
| G693615 | NA | non-coding | upstream | 4090 | 29054018 ~ 29054296 (+) |
| G693613 | NA | non-coding | upstream | 6087 | 29051783 ~ 29052299 (+) |
| G693612 | NA | non-coding | upstream | 11891 | 29046220 ~ 29046495 (+) |
| G693611 | NA | non-coding | upstream | 13683 | 29044309 ~ 29044703 (+) |
| G693732 | NA | non-coding | downstream | 13399 | 29072003 ~ 29072223 (+) |
| G693763 | NA | non-coding | downstream | 40205 | 29098809 ~ 29099076 (+) |
| G693775 | NA | non-coding | downstream | 48565 | 29107169 ~ 29107409 (+) |
| G693814 | NA | non-coding | downstream | 76508 | 29135112 ~ 29135357 (+) |
| G693820 | NA | non-coding | downstream | 83264 | 29141868 ~ 29142147 (+) |
| G693207 | NA | other | upstream | 352634 | 28704850 ~ 28705752 (+) |
| btbd7 | btbd7 | other | upstream | 500013 | 28495104 ~ 28605625 (+) |
| G692424 | NA | other | upstream | 988158 | 28069900 ~ 28070228 (+) |
| xrcc3 | xrcc3 | other | upstream | 1086370 | 27951635 ~ 27972016 (+) |
| G694036 | NA | other | downstream | 732393 | 29790997 ~ 29792747 (+) |
| G699605 | NA | other | downstream | 5068989 | 34127593 ~ 34128301 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 6396244 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 6554560 | 35613164 ~ 35614666 (+) |
| G700864 | NA | other | downstream | 6845445 | 35904049 ~ 35904698 (+) |
