Gene
RNA
| Item | Value |
|---|---|
| gene id | G693820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 29141868 ~ 29142147 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU789796 | True | 280 | lncRNA | 0.48 | 1 | 29141868 | 29142147 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-177p2.6 | LOC106571683 | coding | upstream | 174120 | 28951530 ~ 28967748 (+) |
| cdca4 | LOC106571684 | coding | upstream | 201980 | 28930668 ~ 28939888 (+) |
| LOC110529754 | gp132 | coding | upstream | 225734 | 28889319 ~ 28916134 (+) |
| vipas39 | vipas39 | coding | upstream | 260408 | 28860659 ~ 28881460 (+) |
| LOC110529751 | NA | coding | upstream | 318891 | 28815791 ~ 28825392 (+) |
| LOC110529758 | LOC106571678 | coding | downstream | 198757 | 29340904 ~ 29867575 (+) |
| LOC110529762 | LOC100136382 | coding | downstream | 796962 | 29939109 ~ 29970121 (+) |
| LOC110529765 | LOC106571674 | coding | downstream | 1007841 | 30149988 ~ 30158324 (+) |
| LOC110529766 | LOC107589657 | coding | downstream | 1025974 | 30168121 ~ 30173329 (+) |
| LOC110529767 | LOC107396020 | coding | downstream | 1033592 | 30175739 ~ 30190971 (+) |
| G693814 | NA | non-coding | upstream | 6511 | 29135112 ~ 29135357 (+) |
| G693775 | NA | non-coding | upstream | 34459 | 29107169 ~ 29107409 (+) |
| G693763 | NA | non-coding | upstream | 42792 | 29098809 ~ 29099076 (+) |
| G693732 | NA | non-coding | upstream | 69645 | 29072003 ~ 29072223 (+) |
| G693618 | NA | non-coding | upstream | 83264 | 29058386 ~ 29058604 (+) |
| G693826 | NA | non-coding | downstream | 17983 | 29160130 ~ 29160427 (+) |
| G693831 | NA | non-coding | downstream | 21953 | 29164100 ~ 29164325 (+) |
| G693840 | NA | non-coding | downstream | 31102 | 29173249 ~ 29173468 (+) |
| G693851 | NA | non-coding | downstream | 36983 | 29179130 ~ 29179352 (+) |
| G693859 | NA | non-coding | downstream | 45512 | 29187659 ~ 29187954 (+) |
| G693207 | NA | other | upstream | 436116 | 28704850 ~ 28705752 (+) |
| btbd7 | btbd7 | other | upstream | 583495 | 28495104 ~ 28605625 (+) |
| G692424 | NA | other | upstream | 1071640 | 28069900 ~ 28070228 (+) |
| xrcc3 | xrcc3 | other | upstream | 1169852 | 27951635 ~ 27972016 (+) |
| G694036 | NA | other | downstream | 648850 | 29790997 ~ 29792747 (+) |
| G699605 | NA | other | downstream | 4985446 | 34127593 ~ 34128301 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 6312701 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 6471017 | 35613164 ~ 35614666 (+) |
| G700864 | NA | other | downstream | 6761902 | 35904049 ~ 35904698 (+) |
