XLOC_026136



Basic Information


Item Value
gene id XLOC_026136
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10252159 ~ 10393828 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052951
GAAAATGGGATGTTTTATGTTTCAGCAAGTACCTTTGCTAttcgtttttgtttattttctgtggTAACTACTAGTTGTAACTAGTAAAGAGGAAGATACCATCTGTTCACCTGAACTTCGCGTCAACGCGACCACGCCATGTTAAAGAGCGCCAAAAGGCAGGAGAAGCTACTGACTGATGGAAGGCCAAACACGCGCTGGAAAAGACGCCAGCGCTCCAATTATCAGCGAGGTGTGAAGACGCAGAGCTGAGAGACTCGTTAGCACGTCAGAATGAAAGTAAAATCAGCCGGAGATGCAGCGGAGCCTTTGTGCAGCATGTAATCCTGCAGATATGACACATCCAGACGCACAGACTGAACTGGAGCCAGTGTAATGAGCTGCGAAATCCAGCCAAACAGACACTATACAGCAGCAAAACATTGAGGAACAGTGGGAGAGAAACTCACTAAATCAATTAAGCGGCCACCGGGGTCAGTAATAACAGCACAACAGTTtgctttgctctctctctctctctctctctct

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052951 True 528 lncRNA 0.47 3 10252159 10393828

Neighbor


gene id symbol gene type direction distance location
XLOC_026135 BX539325.1 coding downstream 38939 10213098 ~ 10213220 (-)
XLOC_026134 BX539325.3 coding downstream 65008 10187033 ~ 10187151 (-)
XLOC_026133 BX539325.2 coding downstream 65806 10179191 ~ 10186353 (-)
XLOC_026132 NA coding downstream 115018 10062188 ~ 10137141 (-)
XLOC_026131 NA coding downstream 117404 10060972 ~ 10134755 (-)
XLOC_026138 pctp coding upstream 13630 10407458 ~ 10425313 (-)
XLOC_026139 NA coding upstream 129622 10523450 ~ 10529896 (-)
XLOC_026140 elac2 coding upstream 142129 10535957 ~ 10582384 (-)
XLOC_026141 map2k4a coding upstream 198769 10592597 ~ 10634532 (-)
XLOC_026142 si:ch73-1f23.1 coding upstream 258247 10652075 ~ 10677952 (-)
XLOC_026143 NA non-coding upstream 290494 10684322 ~ 10711294 (-)
XLOC_026144 NA non-coding upstream 298580 10692408 ~ 10693768 (-)
XLOC_026150 NA non-coding upstream 549236 10943064 ~ 10994386 (-)
XLOC_026151 NA non-coding upstream 560881 10954709 ~ 11000449 (-)

Expression



Co-expression Network