G694274


Basic Information

Item Value
gene id G694274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 29748945 ~ 29778258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU790318
GCCCCTTCGCTCGTCCGGcagacacactgactgactgacacccAACGTGTTGTGAGTCTTTGTAGCAGCCAGACATGGGGAAGGAAAGAATGCACCTCAGCTttggcagaggcagagagagagagagcgagagaaagagagagagagagagagaaaaaaaattctgtcagacctggaccctgacgttaaatctcagtaagacacaaATAATGGTGTTCTAAAAAAGGTCCAGTTCCGAGGACcatgaatacaaattccatctagacaccattgccctagagcacacacaaaactattcatacagtgccttgcgaaagtattcggcccccttgaactttttcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU790318 True 342 lncRNA 0.47 2 29748945 29778258

Neighbor

gene id symbol gene type direction distance location
si:dkey-177p2.6 LOC106571683 coding upstream 781197 28951530 ~ 28967748 (+)
cdca4 LOC106571684 coding upstream 809057 28930668 ~ 28939888 (+)
LOC110529754 gp132 coding upstream 832811 28889319 ~ 28916134 (+)
vipas39 vipas39 coding upstream 867485 28860659 ~ 28881460 (+)
LOC110529751 NA coding upstream 925968 28815791 ~ 28825392 (+)
LOC110529762 LOC100136382 coding downstream 160851 29939109 ~ 29970121 (+)
LOC110529765 LOC106571674 coding downstream 371730 30149988 ~ 30158324 (+)
LOC110529766 LOC107589657 coding downstream 389863 30168121 ~ 30173329 (+)
LOC110529767 LOC107396020 coding downstream 397481 30175739 ~ 30190971 (+)
LOC110529768 LOC106571670 coding downstream 449151 30227409 ~ 30243300 (+)
G694259 NA non-coding upstream 14527 29733386 ~ 29734418 (+)
G694207 NA non-coding upstream 97572 29650947 ~ 29651373 (+)
G694172 NA non-coding upstream 144390 29602262 ~ 29604555 (+)
G694138 NA non-coding upstream 221672 29498796 ~ 29527273 (+)
G694144 NA non-coding upstream 226796 29518856 ~ 29522149 (+)
G694296 NA non-coding downstream 1752 29780010 ~ 29781086 (+)
G694297 NA non-coding downstream 2831 29781089 ~ 29781543 (+)
G694311 NA non-coding downstream 25251 29803509 ~ 29804759 (+)
G694332 NA non-coding downstream 92564 29870822 ~ 29871051 (+)
G694333 NA non-coding downstream 93404 29871662 ~ 29871885 (+)
G693207 NA other upstream 1043193 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 1190572 28495104 ~ 28605625 (+)
G692424 NA other upstream 1678717 28069900 ~ 28070228 (+)
xrcc3 xrcc3 other upstream 1776929 27951635 ~ 27972016 (+)
G694036 NA other downstream 12739 29790997 ~ 29792747 (+)
G699605 NA other downstream 4349335 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 5676590 35454437 ~ 35462086 (+)
G700685 NA other downstream 5834906 35613164 ~ 35614666 (+)
G700864 NA other downstream 6125791 35904049 ~ 35904698 (+)

Expression


Co-expression Network