G694342


Basic Information

Item Value
gene id G694342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 29882087 ~ 29882320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU790389
CTTTAGTCTCTCTGTGATTTCATCTTTTTCCATAAATTTGTAAGTGGCTTAATCTCACCGGAGAAATCATCAGAGTGagggaaacagcacccctctgtctcagtatgtgtagcccatgtatctgatgctgtctggaacaaaagagtatgacatgttgTCACAGTAGCATTTGGTTGATTGATGCCAGCAAGcgtttggcctcccttgataaaaacaattataaaataattagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU790389 True 234 lncRNA 0.40 1 29882087 29882320

Neighbor

gene id symbol gene type direction distance location
LOC110529758 LOC106571678 coding upstream 14512 29340904 ~ 29867575 (+)
si:dkey-177p2.6 LOC106571683 coding upstream 914339 28951530 ~ 28967748 (+)
cdca4 LOC106571684 coding upstream 942199 28930668 ~ 28939888 (+)
LOC110529754 gp132 coding upstream 965953 28889319 ~ 28916134 (+)
vipas39 vipas39 coding upstream 1000627 28860659 ~ 28881460 (+)
LOC110529762 LOC100136382 coding downstream 56789 29939109 ~ 29970121 (+)
LOC110529765 LOC106571674 coding downstream 267668 30149988 ~ 30158324 (+)
LOC110529766 LOC107589657 coding downstream 285801 30168121 ~ 30173329 (+)
LOC110529767 LOC107396020 coding downstream 293419 30175739 ~ 30190971 (+)
LOC110529768 LOC106571670 coding downstream 345089 30227409 ~ 30243300 (+)
G694341 NA non-coding upstream 21 29881702 ~ 29882066 (+)
G694339 NA non-coding upstream 3370 29878465 ~ 29878717 (+)
G694333 NA non-coding upstream 10202 29871662 ~ 29871885 (+)
G694332 NA non-coding upstream 11036 29870822 ~ 29871051 (+)
G694311 NA non-coding upstream 77328 29803509 ~ 29804759 (+)
G694373 cep128 non-coding downstream 39346 29921666 ~ 29921961 (+)
G694378 NA non-coding downstream 45831 29928151 ~ 29928370 (+)
G694380 NA non-coding downstream 47398 29929718 ~ 29929953 (+)
G694382 NA non-coding downstream 50351 29932671 ~ 29932985 (+)
G694731 NA non-coding downstream 92889 29975209 ~ 29977194 (+)
G694036 NA other upstream 89340 29790997 ~ 29792747 (+)
G693207 NA other upstream 1176335 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 1323714 28495104 ~ 28605625 (+)
G692424 NA other upstream 1811859 28069900 ~ 28070228 (+)
G699605 NA other downstream 4245273 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 5572528 35454437 ~ 35462086 (+)
G700685 NA other downstream 5730844 35613164 ~ 35614666 (+)
G700864 NA other downstream 6021729 35904049 ~ 35904698 (+)
G702415 NA other downstream 6818118 36700438 ~ 36700739 (+)

Expression


Co-expression Network