Gene
RNA
| Item | Value |
|---|---|
| gene id | G694705 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 29931000 ~ 29931385 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: ryanodine receptor 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU790785 | True | 386 | lncRNA | 0.53 | 1 | 29931000 | 29931385 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529760 | LOC106571680 | coding | downstream | 465556 | 29460990 ~ 29465444 (-) |
| LOC118965624 | NA | coding | downstream | 707236 | 29213787 ~ 29223764 (-) |
| LOC118965608 | NA | coding | downstream | 717421 | 29212152 ~ 29213579 (-) |
| LOC118965623 | NA | coding | downstream | 722072 | 29204150 ~ 29208928 (-) |
| LOC118965622 | NA | coding | downstream | 727520 | 29202386 ~ 29203480 (-) |
| gtf2a1 | LOC106571676 | coding | upstream | 41126 | 29972511 ~ 29986359 (-) |
| ches1 | LOC105017690 | coding | upstream | 70379 | 30001764 ~ 30062244 (-) |
| LOC118965505 | NA | coding | upstream | 107196 | 30038581 ~ 30040011 (-) |
| LOC110529769 | LOC106571671 | coding | upstream | 285623 | 30217008 ~ 30227240 (-) |
| LOC100135953 | LOC100135953 | coding | upstream | 312119 | 30243504 ~ 30251391 (-) |
| G694697 | NA | non-coding | downstream | 9547 | 29921128 ~ 29921453 (-) |
| LOC110529761 | cep128 | non-coding | downstream | 36227 | 29890555 ~ 29938331 (-) |
| G694673 | NA | non-coding | downstream | 42419 | 29888306 ~ 29888581 (-) |
| G694631 | NA | non-coding | downstream | 146087 | 29783478 ~ 29784913 (-) |
| G694488 | NA | non-coding | downstream | 397249 | 29530229 ~ 29533751 (-) |
| G694706 | NA | non-coding | upstream | 426 | 29931811 ~ 29932043 (-) |
| G694865 | NA | non-coding | upstream | 87512 | 30018897 ~ 30086140 (-) |
| G694860 | NA | non-coding | upstream | 93465 | 30024850 ~ 30027627 (-) |
| G694898 | NA | non-coding | upstream | 163369 | 30094754 ~ 30094981 (-) |
| G694901 | NA | non-coding | upstream | 168797 | 30100182 ~ 30100426 (-) |
| G693665 | NA | other | downstream | 972168 | 28958395 ~ 28958832 (-) |
| G693383 | btbd7 | other | downstream | 1336569 | 28593341 ~ 28594431 (-) |
| si:dkey-85n7.8 | NA | other | downstream | 1449102 | 28478817 ~ 28481944 (-) |
| G692859 | NA | other | downstream | 1814952 | 28115736 ~ 28116048 (-) |
| G691747 | NA | other | downstream | 2615065 | 27315568 ~ 27315935 (-) |
| G694858 | LOC105017690 | other | upstream | 70378 | 30001763 ~ 30062168 (-) |
| G696068 | NA | other | upstream | 915517 | 30846902 ~ 30847209 (-) |
| G696073 | NA | other | upstream | 923722 | 30855107 ~ 30855407 (-) |
| G696499 | NA | other | upstream | 1545969 | 31477354 ~ 31478027 (-) |
| LOC110529793 | LOC106571728 | other | upstream | 1726341 | 31657632 ~ 31703525 (-) |
