G694858 (LOC105017690)


Basic Information

Item Value
gene id G694858
gene name LOC105017690
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30001763 ~ 30062168 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU790962
CCAGAAACGCAGAGCTGGGGCGGAAATGGAGGGGCTCAGGCTCAGTGGAGGGAACTGACATTGCaaactaggagaggagaggtagaactatcggagaggaggaaaggaaggggCTCGTCTGGACAACAGAAGGATTCTAAGagTATAGGTAAAGGCTCGTTGTGGTCCATAGATCCAGAGTACCGAAACAACCTGATCCAGGCTTTGAAGAAGACCCCGTACCACCCCTACTCCCCAGGACTGgttaccccctccacctctccccccacctctcctcagGCGTATCACAGTTCCTCAAGGCGTGATCCAAAATGGGGCCCGCATCAGGAGCCAGGGTCTGTTTCCTGTCATCCGACCCCTACCCATATGCTCCGTGGGAAGCAGAACCACTGCGATAAGgtCAGCTCTGGGGGATTACCTGACCCAAGGCAACATCGGCCACCCCTGtgactctccctccccccctcccagcGACGACCTCCAGGAGGACCACAACTACAGCACCGCCAAATCCCCCAGCATGCCCTGCTCTTCCCAGGGGCCCTCCACGTTAGACGATGATGATGACATCATCGCGGTGGAGGTCGGCGTCCACCGAGAGGTCAAATCGGAACCTCAAGAAGTCCCGCTGGACTCtgcctctgtctccttcctctcccagCATGCCCGGCGACGGGGCCTGCCCTGGACGAAAAACCGCCTACGGGCCCTGGGCGACACGCTGCCGCTGAAAAAGCGCCGTTCAGCAGCAGCAGCGGTGGAGAAGCCACCGTCGGAGAGCGATGACGAGGAGATGAAGGAGGCGGCGGGGTCGTTGCTTCACTTGGCGGGCGTCAGGGCGTGTCTCAACAACATCACTAACCGCGCCGCCAAGGCTGCTCAGAAGGAGAAAGAGCAGAAAGAGGCCCTAAGGAACTAACTAAGGCCTACACATCTGGTCTACACACCAACCACCAAGACCTAGAAACTAATAGCTAAGACACACTGCAAAGACCAACTGCTTTTAACAGTTGGTTCTCACGGTGTATTTTGTCTCTAATGCCTGATTCCCACTATAGGGCCGACCCTAACTGTAGCCTATACTGTGCTGGCTCGGATATATTCTTTTCAGATTTTGCTTTCCAGCATGGTTCCAGCAGCAATTATGGTGGAtgcgtaaccaggccagcccagtacagtttGGTTTGgcagtagtgtgaaaagggtatatGGCCAGGCCTGAGCGCAGAGAGACCTACAGTAGGACTACACACCAGGTCTACACACCGACCAACCAACCACCAACAGGCCAAGAGATAACGTTATTAAGCATTAGTCTCAATAGACactactccatctctctctctctttaacctttaacctctatctctcctccaggGGCATTAGGAGAATCCTACTTATTTATGGCAATATCAAAAATCTGTTTTTACTATACGTTTCCTGTGTGTTTCAACACTAACTCTGATGGGTAATTGATTCTCACGTGTCTCTGTTGATGTTTTTATGTTGTGTAAAGGGGATGCAAGCcatagaaaaacacattttttttgtcactaATTAGGGAAATACATGCTAAAAAAAATAGAACCATTGAGGAGAATAGCTGAGCGTTTTGTGTCATCTGTAACTTGTCAGAAGTGTATCTGTGAATTTGTAGCAATCTTCCAGTAATGTAAGCCAGGAAGTTGAGCCAATGATACTAACAGATTGAAAACTGTTCAAACTTGCTGCTCACACACGTCATCCTACGCCCATGAGCACAACATGTAAGACTGTGCCAAAGACGAGCGATCGGGTTGCTTCAATGTAGCCAATCTGACAGCTTACAAAGACAAACATAAAAGGCATAGCAACATCAGAAGACCTGTAGAGAAGAGATAGGAGAACACCGTAAATGTCTCAATAATTGTAAAATCCATTCTTAAAGAATCATGCTCTTATTTCTATTCATTACGGTGATTTCTATCACCAATAGTAAAAGCATCATTGAGAATGGGCATGATTCCATTAAGATCACTCCTTAGTATTTAAGCATAGTTAGAACTATACTGTTAATCTACTGTTCAGTTTTTGGTGCCATGGTGATGACTTAGTGCTGGGTCAGAGGCAATATACTGTATCTCATCCATCTTGTTCTTGTTTCTCAGCTGTGTTTGAAATGTCCTCCTGTTCCCTttttagtgcactatttttgaccagaaccACATGgatctggccaaaagtagtgcgctatgggGTTGATGGGCTCTGGACAAAAGGAgagcactatattgggaatagggtgcaatttcagACATACAGTAGCCTAGACGTCCCTGAAACTCTTCCAGTATTCCTCTTCCACAAACGGGAACGCCGGTTTAAATATAACCCATGCTACGACACCTGCCTATCATTTTTACAGACTCAGAAAACTATATACATAAAGTGTGGATTCGTTGTTGTTTCTTGCAATTCTGTTTGTATTGTTTCcccttcttcctctaccctcataAAAGTATAAGCAATTTGTCCAGTCTGGACAACTCTGTAAAAAGGTtagaaaatattttatttttcctttCTTAATTGAAGCAATTTGACCTGCAGGACTTTCTCAGTTATATTGCATGGGTGCTTGTAAATAAGATGCAAAAGTAAATCTTTTTTTATTCAAAGATCATGTaagataaacaatgtatttaGCATGAAGCATGACTTATTTTCATATAAACTTAGATCCTAGAAGAGAAAACAAAGGTTTTGCCACCAATTCTTATACACtcaattttatttaattttattttcgatttaaaaaaaaaatgtattgatatTGTATTTCTTCAGATGAGCGGGCTTTTAATGACATATCTTCTTCAGGGAGACATTTTATGGGGAAATCACTCTGCAATTATGAGGCCCGGCTACTCTGGGCTTTAAGTataacagacctgggttcaaaaactatttgaaattatttcaaataatTGAATATGTGCTTAATTGAGCTTGCCTGTTGCAATGCAACCAATAGtaaagtcccaaaagtgcaaaccccgccCACCTGGCACCCCAGCCAGGCTAAAGCAAACTGTAAAATGATTTGAAAGGTTTCaagtagtatttgaacccagtctGTTAGCTCTACGGCTAGATGGATCAACTGAAAAGCCTCTACTATGGCCTTCAGTCTTCTTCTGCCTCTTAAACAATAAATGTGTCAGTGTTCTAGTGTTGTTCAGAATATATCaatagtgtgtgagtgtgtgtgtgtccaacaaCCATACACCCTTTAACATTGTGCCTGCCCTCCAGACTTAATTGTATTCCGATGTCTTTAGCTGACATGTTTTCACATTGAACAGCACATATTTCTTTATTTCTGAAAgtgttttctctcattttgttctGTAAATGTGTTACCATTGGGTCCTAGTTTTCTCCTCCCTGGCAGACACTTCCCTGTAAATGGACGGAGCATTATGGACCTGTTTGACATGGAATTTAGAATTTGTCAGAATGTTCCACCGTTTTAACTGGCTCCAACTAGCACAGCCAAACCTTTTGTTGAAAGTTACCCTACCATGAACTGACTGAGGATGTATGTACATAGAGTGGAGTTACTGTACATGATGAACACGTTTCTGTACAAACAGCAGAGGTAATTAGGGGTTAGAAAGAGGTTGTGTGCAGACAGTAGGGAGAGGCAGAGTCAGAGAGAGCCAGACTCTGGTTTGGGTTTATGGGAAAGACTGAGAGTGACTGACAGCTAGACTGGGAGTTAGACAAGCAAATGACAGCAGAGTTCCATTGTCATAGTATTCTATCAACTTTGATACGGAACACTGACTATTCTAttcaattcaatgtgtttctTCTATCAATGTTGACATGAAATAGACTCACTCCCCGTATACCTCACTGCCATCTCCACTTCCTCTCTTGACACTAGAGAAGTGTTATGGTGTTACAGGTCAAGCCCTCTGTGTTATTTGCAGTAGGAAGTCAGTGAACTGGTGACTAATAGTAGAGTCTGCCGTGGCAAGTCAAGGAGAATGTGTTGCTTAAGTAACCACCATCTCCTCCAGTGACTCACATGgtgagtgtgtcccaaatggcactacttttgaccagagctaatagggctctgttcaaaagttgtgcactatatagggaataggatgccatttcggACACTTCCAGTGACATGCAGGGAAGGAAGGTGAAGTTAGGACCATATAAGGGTCTGCTTGACAAATAGAATGATACCGGGAAATAGGACTGAGTTTTTAATGCAAAGGGAAGAAAAATAAGAAACTCTATCACTGCCTGAAAAGCCCTCGAATGAGAAACAAATGTGCTTAttttatttgaactaaaacctgccAAACTAAACCATGCTCaaagtgtgcatcccaaatggcaactcattccctatatagtgcacttttcTTTCAAACGTAGTGCATTacaaagagaatagggtgccatttgggagtcgCCCAAGGCAAGCCTGCCAGCCAGTCCGCCATTTTGTTTTCtattaacgttttttttttttgtgtttgtttactcTGACAAGACGTTACAATACTGCCACGTTAATGACTATTTGAGAAGGGTCAGAAAGCCATAGAATAGAGATGTCAAACGCAAACAACTATGTTGCTCTATGAGAAGAATCGATGTAATGCAGAGTGCACCCAGCTTGGTTGGTTTTCCAATGAATGTTTGATTATTTCCTTGTTGTGCAATCACATTGCCAAAGAACGATTTCAAGCGATTTCAGCGATTTCATTCATGTAAATATCACGTTGTCCAATACCgtggcaaaaaaaaaatgtagaaatgttgtttttttcttttcaaTTTTTCTGAAACCTTCAATAATGTTTATGTGGTGTATTGTCTTCCAGTTGCAATGATTAAAGTTGACCTGAACTCAAC
>TU790963
CCAGAAACGCAGAGCTGGGGCGGAAATGGAGGGGCTCAGGCTCAGTGGAGGGAACTGACATTGCaaactaggagaggagaggtagaactatcggagaggaggaaaggaaggggCTCGTCTGGACAACAGAAGGATTCTAAGgAGAGAGTCCAGGGCTGGATGGGACCCACCATGCCGCCCAGTAAGAAGGCCCAGAGCCCCAGCAGTGGTTTGGGAGCGACCCGGGGTCTGAGTCCCCTGCAGGACCCCGACGGTCACCCTCTacccccccactccccctcctcctcctccccttcccccgaCCCATGTGATTCTTCCCAATACGACCTGGCCACGGGAGCCAATCGGAAGCCTCCGTACTCGTTCAGCTGTCTGATCTTCATGGCAATAGAGGACGCACCATCCAAGAGGCTGCCGGTGAAAGATATCTATGGTTGGATCCTGGAGCATTTCCCGTATTTCGCTAGCGCCCCTACTGGTTGGAAGAACTCGGTATGAAGACGAGGAGGCATACAAAGacttcaccctccctacacctctgatgaatataacaggaaacctgtttgATCACCATGCtctgcaaaatcattctggctatggatacagagaacatcaacacattaacatcatCACACCattggacttggggctctgctgggagtttacctcatatTTAGATTGTTTTATTCTGCTTTGCCtctaaaatcataataaacac

Function

NR:

description
forkhead box protein N3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU790962 False 4926 TUCP 0.43 5 30001763 30062168
TU790963 True 718 TUCP 0.53 5 30038588 30062168

Neighbor

gene id symbol gene type direction distance location
gtf2a1 LOC106571676 coding downstream 15404 29972511 ~ 29986359 (-)
LOC110529761 cep128 coding downstream 63432 29890555 ~ 29938331 (-)
LOC110529760 LOC106571680 coding downstream 536319 29460990 ~ 29465444 (-)
LOC118965624 NA coding downstream 777999 29213787 ~ 29223764 (-)
LOC118965608 NA coding downstream 788184 29212152 ~ 29213579 (-)
LOC110529769 LOC106571671 coding upstream 154840 30217008 ~ 30227240 (-)
LOC100135953 LOC100135953 coding upstream 181336 30243504 ~ 30251391 (-)
LOC110529225 LOC106571669 coding upstream 201417 30263585 ~ 30292341 (-)
LOC110529226 gphn coding upstream 230283 30292451 ~ 30419612 (-)
LOC110529771 LOC106571665 coding upstream 467121 30529289 ~ 30687478 (-)
G694706 NA non-coding downstream 69720 29931811 ~ 29932043 (-)
G694705 NA non-coding downstream 70378 29931000 ~ 29931385 (-)
G694697 NA non-coding downstream 80310 29921128 ~ 29921453 (-)
G694673 NA non-coding downstream 113182 29888306 ~ 29888581 (-)
G694898 NA non-coding upstream 32586 30094754 ~ 30094981 (-)
G694901 NA non-coding upstream 38014 30100182 ~ 30100426 (-)
G694904 NA non-coding upstream 41804 30103972 ~ 30104230 (-)
G694908 NA non-coding upstream 45638 30107806 ~ 30112851 (-)
G694919 NA non-coding upstream 63577 30125745 ~ 30125947 (-)
G693665 NA other downstream 1042931 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 1407332 28593341 ~ 28594431 (-)
si:dkey-85n7.8 NA other downstream 1519865 28478817 ~ 28481944 (-)
G692859 NA other downstream 1885715 28115736 ~ 28116048 (-)
G691747 NA other downstream 2685828 27315568 ~ 27315935 (-)
G696068 NA other upstream 784734 30846902 ~ 30847209 (-)
G696073 NA other upstream 792939 30855107 ~ 30855407 (-)
G696499 NA other upstream 1415186 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 1595558 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 2152318 32214451 ~ 32217572 (-)

Expression


Co-expression Network