Gene
RNA
| Item | Value |
|---|---|
| gene id | G694817 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 30143941 ~ 30144693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 7B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU790903 | True | 629 | lncRNA | 0.44 | 2 | 30143941 | 30144693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529762 | LOC100136382 | coding | upstream | 173820 | 29939109 ~ 29970121 (+) |
| LOC110529758 | LOC106571678 | coding | upstream | 276366 | 29340904 ~ 29867575 (+) |
| si:dkey-177p2.6 | LOC106571683 | coding | upstream | 1176193 | 28951530 ~ 28967748 (+) |
| cdca4 | LOC106571684 | coding | upstream | 1204053 | 28930668 ~ 28939888 (+) |
| LOC110529754 | gp132 | coding | upstream | 1227807 | 28889319 ~ 28916134 (+) |
| LOC110529765 | LOC106571674 | coding | downstream | 5295 | 30149988 ~ 30158324 (+) |
| LOC110529766 | LOC107589657 | coding | downstream | 23428 | 30168121 ~ 30173329 (+) |
| LOC110529767 | LOC107396020 | coding | downstream | 31046 | 30175739 ~ 30190971 (+) |
| LOC110529768 | LOC106571670 | coding | downstream | 82716 | 30227409 ~ 30243300 (+) |
| LOC110529770 | LOC106571673 | coding | downstream | 106773 | 30251466 ~ 30263484 (+) |
| G694816 | NA | non-coding | upstream | 1727 | 30141956 ~ 30142214 (+) |
| G694815 | NA | non-coding | upstream | 2629 | 30141092 ~ 30141312 (+) |
| G694814 | NA | non-coding | upstream | 3187 | 30140480 ~ 30140754 (+) |
| G694813 | LOC106581475 | non-coding | upstream | 6173 | 30137542 ~ 30137768 (+) |
| G694812 | NA | non-coding | upstream | 6849 | 30136775 ~ 30137092 (+) |
| G694818 | NA | non-coding | downstream | 14 | 30144707 ~ 30144980 (+) |
| G694819 | NA | non-coding | downstream | 573 | 30145266 ~ 30145467 (+) |
| G694986 | NA | non-coding | downstream | 56773 | 30201466 ~ 30201774 (+) |
| G694970 | LOC107693096 | non-coding | downstream | 77694 | 30222387 ~ 30222914 (+) |
| G694036 | NA | other | upstream | 351194 | 29790997 ~ 29792747 (+) |
| G693207 | NA | other | upstream | 1438189 | 28704850 ~ 28705752 (+) |
| btbd7 | btbd7 | other | upstream | 1585568 | 28495104 ~ 28605625 (+) |
| G692424 | NA | other | upstream | 2073713 | 28069900 ~ 28070228 (+) |
| G699605 | NA | other | downstream | 3982900 | 34127593 ~ 34128301 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 5310155 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 5468471 | 35613164 ~ 35614666 (+) |
| G700864 | NA | other | downstream | 5759356 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 6555745 | 36700438 ~ 36700739 (+) |
