XLOC_026143


Basic Information

Item Value
gene id XLOC_026143
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10684322 ~ 10711294 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052952
CTGAAAACAGTGAATGGTGATCGTATGCTGGAAGATCTGCGATTCATTGTCTTCCCTTCTGAATGTGTCTTTGCCATATCTCTGCTGATCTCTGGATTATTTCCGTCTTGTATTGTGAAGTGTCTGCAGTTTTTTCAgAAAAGGGTGAAATCTAAAGGAACTAAAAAGCAAAACACAACAGGATCACAACTGACCAGGCTGAATGCTGAATATCAGGAGGAAAATCTGCTTGATTCAGGCAAAACACAAAAAGATCAGTGATGGAAGAATGGGATTTTTCCAGATGTCTTCTGCGCACTGCACAAGATCTCAAAACACACTTTTTCTGAAAAACTGCTTTAATACAATTTGAAttgtaaaaaatgaaatgaaatgaaaatgtttgtgtgatgaattaaaataatgaagctttgtaatattacattatttgttgGTGATATAGAGTACTTGTTTTCCTGTAGTGGAATTGCCAGGGTTGAAGAGATTGCGTtttatatattagttttatttgttcatttaaaatagAGATCCAACTTTGTTTCCGatt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052952 True 547 lncRNA 0.35 4 10684322 10711294

Neighbor

gene id symbol gene type direction distance location
XLOC_026142 si:ch73-1f23.1 coding downstream 6370 10652075 ~ 10677952 (-)
XLOC_026141 map2k4a coding downstream 49790 10592597 ~ 10634532 (-)
XLOC_026140 elac2 coding downstream 101938 10535957 ~ 10582384 (-)
XLOC_026139 NA coding downstream 154426 10523450 ~ 10529896 (-)
XLOC_026138 pctp coding downstream 259009 10407458 ~ 10425313 (-)
XLOC_026146 zgc:112965 coding upstream 17676 10728970 ~ 10751491 (-)
XLOC_026147 CU210890.1 coding upstream 31942 10743236 ~ 10749691 (-)
XLOC_026148 znf1004 coding upstream 51427 10762721 ~ 10779777 (-)
XLOC_026149 CR382337.3 coding upstream 202819 10914113 ~ 11008532 (-)
XLOC_026150 NA coding upstream 231770 10943064 ~ 10994386 (-)
XLOC_026136 NA non-coding downstream 290494 10252159 ~ 10393828 (-)
XLOC_026135 BX539325.1 non-coding downstream 471102 10213098 ~ 10213220 (-)
XLOC_026134 BX539325.3 non-coding downstream 497171 10187033 ~ 10187151 (-)
XLOC_026133 BX539325.2 non-coding downstream 497969 10179191 ~ 10186353 (-)
XLOC_026151 NA non-coding upstream 243415 10954709 ~ 11000449 (-)
XLOC_026153 NA non-coding upstream 307175 11018469 ~ 11049191 (-)
XLOC_026157 NA non-coding upstream 542178 11253472 ~ 11253867 (-)
XLOC_026158 NA non-coding upstream 587498 11298792 ~ 11303928 (-)

Expression


Co-expression Network