G694970 (LOC107693096)


Basic Information

Item Value
gene id G694970
gene name LOC107693096
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30222387 ~ 30222914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU791096
GATTTTTTCAGAAATGGCGCACACAGAAATGTAAGGGGAAAATTACGCAACGGTAATACATGAGGCCCCTGAGCTTTACAGTGACACAATGATATGAGAGATTCTTACCGTCAACCTTGACCCTGTGCGGCCCCAACGACGCCATCGCCTGTGGTGCCTTTCGTATTGCTGTCCAGTCTTCAAGTATATCCAGGTCTTGCAGCATATAAACAATATACGGACCGGAGACGACAAcaggcttcttcttcttggcAGGGCAGAAGGGATCCCTCTTCTTGTTCTTCCGTGAATGTAAACCATCGTTCCAAAGTTCTGGAATGCAGAGAG

Function

NR:

description
breast cancer metastasis-suppressor 1-like protein-A isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU791096 True 327 lncRNA 0.47 3 30222387 30222914

Neighbor

gene id symbol gene type direction distance location
LOC110529767 LOC107396020 coding upstream 31416 30175739 ~ 30190971 (+)
LOC110529766 LOC107589657 coding upstream 49058 30168121 ~ 30173329 (+)
LOC110529765 LOC106571674 coding upstream 64063 30149988 ~ 30158324 (+)
LOC110529762 LOC100136382 coding upstream 252266 29939109 ~ 29970121 (+)
LOC110529758 LOC106571678 coding upstream 354812 29340904 ~ 29867575 (+)
LOC110529768 LOC106571670 coding downstream 4495 30227409 ~ 30243300 (+)
LOC110529770 LOC106571673 coding downstream 28552 30251466 ~ 30263484 (+)
LOC118965506 NA coding downstream 432707 30655621 ~ 30665458 (+)
LOC110529772 LOC106571664 coding downstream 586575 30809489 ~ 30878195 (+)
ndufb1 NA coding downstream 821113 31044027 ~ 31047423 (+)
G694986 NA non-coding upstream 20613 30201466 ~ 30201774 (+)
G694819 NA non-coding upstream 76920 30145266 ~ 30145467 (+)
G694818 NA non-coding upstream 77407 30144707 ~ 30144980 (+)
G694817 NA non-coding upstream 77694 30143941 ~ 30144693 (+)
G695005 LOC106571669 non-coding downstream 46612 30269526 ~ 30272291 (+)
G695018 NA non-coding downstream 69640 30292554 ~ 30293187 (+)
G695022 NA non-coding downstream 73751 30296665 ~ 30297082 (+)
G695021 NA non-coding downstream 77136 30300050 ~ 30386665 (+)
G695025 NA non-coding downstream 79539 30302453 ~ 30383334 (+)
G694036 NA other upstream 429640 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 1284114 28930668 ~ 28939888 (+)
G693207 NA other upstream 1516635 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 1664014 28495104 ~ 28605625 (+)
G692424 NA other upstream 2152159 28069900 ~ 28070228 (+)
G699605 NA other downstream 3904679 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 5231934 35454437 ~ 35462086 (+)
G700685 NA other downstream 5390250 35613164 ~ 35614666 (+)
G700864 NA other downstream 5681135 35904049 ~ 35904698 (+)
G702415 NA other downstream 6477524 36700438 ~ 36700739 (+)

Expression


Co-expression Network