G695704 (LOC107579696)


Basic Information

Item Value
gene id G695704
gene name LOC107579696
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30853155 ~ 30854261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU791908
gcgaagccgagaaagcgctgcagctcgacgcgtgacttaggggcgggccaatcaatgacagcttggaccttagcgggatccatcttaatgccttcagcggaaataacagaaccgagaaatgtgacggaggaggcatgaaaagtgcacttctcagccttcacaaaaagacaattctctaaaaggcgctggaggacacgtcgaacgtgctgaacatgaatctggagtgacggtgaaaaaatcaggatatcgtcaaggtaaacgaaaacaaagatgttcagcatgtctctcaggacatcattgactaatgcctgaaagacagctggagcgttagcgaggccgaaaggaagaacccggtattcaaagtgccctaacggagtgttaaacgccgtcttccactcgtccccctccctgatgcgcacgagatggtaagcgttacgaaggtccaacttagtgaaaaacctggctccctgcaggatctcgaaggctgaagacataagaggaagcggataacgattcttcactgttatgtcattcagccctcgataatctatgcaggggcgcagagacccgtcctttttcttgacaaaaaaaaaccccgctccggcgggagaggaggaggggactatggtaccggcgtcaagagctacagacaaataatcctcgagagccttacgttcgggagccgacagagagtatagtctaccccgggggggagtggttcccggaaggagatcaatactacaatcatacgaccggtgtggaggaagagaggtggccctggaccgactgaacaccgtgcgcagatcgtgatattcctccggcacccctgtcaaatcaccaggctcctcctgtgaagaagagacagaggaaacaggagggatagcagacattaaacatttcacatgacaagagacgttccaggagaggatagaattactagaccaattaatggaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaattaaaaaagaaatggtttcgctatgattaccagaaacagtgagggttaaaggtagcgtctcacgctgaatcctggggagaggactaccatcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU791908 True 1107 lncRNA 0.50 1 30853155 30854261

Neighbor

gene id symbol gene type direction distance location
LOC118965506 NA coding upstream 187697 30655621 ~ 30665458 (+)
LOC110529770 LOC106571673 coding upstream 589671 30251466 ~ 30263484 (+)
LOC110529768 LOC106571670 coding upstream 609855 30227409 ~ 30243300 (+)
LOC110529767 LOC107396020 coding upstream 662184 30175739 ~ 30190971 (+)
LOC110529766 LOC107589657 coding upstream 679826 30168121 ~ 30173329 (+)
ndufb1 NA coding downstream 189766 31044027 ~ 31047423 (+)
LOC110529776 LOC106571659 coding downstream 200949 31055210 ~ 31097963 (+)
LOC110529228 LOC106571658 coding downstream 275249 31129510 ~ 31140471 (+)
LOC110531085 NA coding downstream 291273 31145534 ~ 31146912 (+)
si:dkey-174m14.3 LOC106571655 coding downstream 303611 31157872 ~ 31204182 (+)
G695703 NA non-coding upstream 2541 30850360 ~ 30850614 (+)
G695691 NA non-coding upstream 15165 30837711 ~ 30837990 (+)
G695689 NA non-coding upstream 25357 30826636 ~ 30827798 (+)
G695686 NA non-coding upstream 29766 30823097 ~ 30823389 (+)
G695680 NA non-coding upstream 40633 30812258 ~ 30812522 (+)
G695705 NA non-coding downstream 540 30854801 ~ 30855122 (+)
G695730 NA non-coding downstream 46848 30901109 ~ 30901445 (+)
G695732 NA non-coding downstream 49072 30903333 ~ 30905627 (+)
G695733 NA non-coding downstream 51496 30905757 ~ 30909773 (+)
G695734 NA non-coding downstream 55598 30909859 ~ 30911517 (+)
G694036 NA other upstream 1060408 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 1914882 28930668 ~ 28939888 (+)
G693207 NA other upstream 2147403 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 2294782 28495104 ~ 28605625 (+)
G692424 NA other upstream 2782927 28069900 ~ 28070228 (+)
G699605 NA other downstream 3273332 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 4600587 35454437 ~ 35462086 (+)
G700685 NA other downstream 4758903 35613164 ~ 35614666 (+)
G700864 NA other downstream 5049788 35904049 ~ 35904698 (+)
G702415 NA other downstream 5846177 36700438 ~ 36700739 (+)

Expression


Co-expression Network