G696105


Basic Information

Item Value
gene id G696105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30904598 ~ 30905612 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU792352
GATGATATTACAACCAAATAGTTAACATGTATTTAACAATCCCTTTGAAACGGTGCGCAGTTGTCAATGGTTTGAGCGGAGCTGGGGGTCTCCTTGCCTCCCCAGCAGGCAAATTGAATGCTCTGCATCTTATTGTGAGGTTTTATTAATAATGACCTATTGGTGTGTATtctcccccaaaaaatattttactGAAAATATGATAAATACCAGAATTCCTATGATAACCAATATACTTTATGTGCAAGTTGTTATGATATACTAGATGCTATACCCTTTGGTTTAAAGTAACTTAAAGGATTCGGGCATGCTTTTTTGATGCATGCGGCCATAGCCCCTACCACTCCCATTGTTTCACTAACATAGATGCTAACGCTGGCTGCGGGGTAAGTAGATAAAGAAAACTAAGCCATAGTTTTGGTCAATGTCTCTCAGGGTTAAATTATTTCAAATGTTGGTGTACTTCCCCCTTTAAATGGCAGTGAATTTTACCACAAATTAATATTTTCTTCAAGAAACTGAAAACTAAATGATACTATAGTAAAATGGTAAATGAGCTTTTCAGTACTAATTGTACTTTGGAAAAAAGCTGCACATTAtatgaaggaaaaatacattttctttttgCAAAATATGTAAATTAACTGTAATATTGCTAAAATAATAGTCCAGATAACAATAATGACATGTCTAATGATGTTTTGATAATAAATAAGGTGATCTTTTGCTGTGATTGTTAATGAATAATTTCTTATTAGGGTCAAAATGTCACTTGATGGTGAAGAAGTTTCACTTTTCACTTTGTCACGCTGTTAGATTGAGGTTTACGGTATTTTTTGCTCTTTGCACAATTTGTTTGCGCTATGAAAAtgttgcccacacacacacacacacacacacaaacgtttaATAACTAACTATAAGTACTGAACATCGGAGTGGAACCATATGTAATTCTCTTGAATGAATGCGACCAGATGCACTGTGAGCTCAATGTGATGTGGGAGTCATTTGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU792352 True 1015 lncRNA 0.35 1 30904598 30905612

Neighbor

gene id symbol gene type direction distance location
LOC118965507 LOC106569332 coding downstream 135253 30767251 ~ 30769345 (-)
LOC110529771 LOC106571665 coding downstream 217120 30529289 ~ 30687478 (-)
LOC110529226 gphn coding downstream 484986 30292451 ~ 30419612 (-)
LOC110529225 LOC106571669 coding downstream 612257 30263585 ~ 30292341 (-)
LOC100135953 LOC100135953 coding downstream 653207 30243504 ~ 30251391 (-)
LOC110529773 LOC106571662 coding upstream 6519 30912131 ~ 30989709 (-)
LOC110529774 cpsf2 coding upstream 118764 31024376 ~ 31044032 (-)
LOC110529775 LOC106571660 coding upstream 141898 31047510 ~ 31051722 (-)
trnaa-ugc-25 NA coding upstream 164731 31070343 ~ 31070417 (-)
LOC110529227 LOC106571657 coding upstream 193914 31098780 ~ 31120500 (-)
G696101 NA non-coding downstream 6204 30897492 ~ 30898394 (-)
G696069 NA non-coding downstream 56427 30847385 ~ 30848171 (-)
G696061 NA non-coding downstream 65953 30838409 ~ 30838645 (-)
G696058 NA non-coding downstream 76348 30828040 ~ 30828250 (-)
G696056 NA non-coding downstream 76615 30826637 ~ 30827983 (-)
G696108 NA non-coding upstream 155 30905767 ~ 30907643 (-)
G696113 NA non-coding upstream 12448 30918060 ~ 30919501 (-)
G696114 NA non-coding upstream 15599 30921211 ~ 30921442 (-)
G696115 NA non-coding upstream 16058 30921670 ~ 30921960 (-)
G696120 NA non-coding upstream 25908 30931520 ~ 30931743 (-)
G696073 NA other downstream 49191 30855107 ~ 30855407 (-)
G696068 NA other downstream 57389 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 842430 30001763 ~ 30062168 (-)
G693665 NA other downstream 1945766 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 2310167 28593341 ~ 28594431 (-)
G696499 NA other upstream 571742 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 752114 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 1308874 32214451 ~ 32217572 (-)
G697774 LOC106571626 other upstream 1593187 32498799 ~ 32499410 (-)
G698356 NA other upstream 2083633 32989245 ~ 32990061 (-)

Expression


Co-expression Network