G696108


Basic Information

Item Value
gene id G696108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30905767 ~ 30907643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU792355
gtattttcagataCGTGAGGGGAGCCTATCCATTTGGCATGTAGCTAGATAAGCAAACAACATGTGTCATTTAGCTTGCTTCATCAGAGATTAGGCTTTTGGAAAGAGCTTGACATTGGCAAGTCCTCGTCCTGGTAAAGTTGTCAATTAGACTACTGTCATCACCACTATAGATGGTAAGCAAATCAATAAGTATGTGACTGACCGGCTTGATTCAGTCTTGTGTAGCaaatttttttaatatatttttttacattggataaaaatagactcagagctagaaaattgtatatcatacactacagttgaggaacaatgggaaaataattctgctttaaaagttgataaacttgttacctcaaaatggcccttgaatgtttaggtaaacctactggagagctgttcattgtctacactcattcagcatcgtccacaccctcttaagccttagccccacccacctctttaaggattcacatgtcaGGCCATGTGCCAAGCAACCAAAGagttcaagactaaaggctggtttatacgaCGTCTGTCGACAGTGgtcacagtgacatcatgaacattctattgtttaACATCAAACTTGTCGTTGTCATTGTGAAAAAGTATGAGCACAAAAACTACAagctgcatgacatcagcagcctggtagtttaacaccaataaacccagccgtttaaaaaaaactatttagtatATGTCAAactagcaaaccaggcaacttAAAGCAACTtaaagcaactttctaaacaattAAACAGTTCAAATATTGACCACATTATATAGCTGACAATGTCTTCACTTTAGCTCATTTGTCTTCAtcattacaggaaaataaactcgcAACAATATCAATATTTATAAGTTAATGGTGAGCcaattacaaaaaaaatatcttTCTACCAGATAATTTTTGAACTTGGACACTGTCTCTTTGGCCTAACGTTAAATACTAATTTGCAGCtcatgttcttcacattactgtTTCTGCTAAACACATACTTTTGCAATTCTACTacgtgatatatatatatattttaaagacgCGTtggaaaggattacctacacatactgaccagctcttGTTATAGACAGAAGGGTGCTagatggcagaccaatccaaactcatctctcagcatgtccagcccatccattctctcagccaatcatggctagcgggaagattcttgcctttttctgtggctaaaccaactaggctcgtaattgaaCAATTTTATTTGTGTTTACAGATAGCATACAAGTTTGCTATTAAGGCACATTAAAGTTtgcatgttccagaaggcatttctaccAAAAAACAGGTTTTGATTTTTCTTTTTAGGTTTATGTTCAAATGCTTCTCCTGGGAAGCGGTGACGcacgacatatgcctagtttcctgaaacaagtcacatattTGAATACACAGCCATCTAGTTTATCCCCTGAAAGTTAGCTTGTTAACTAGCCATATTGACGTGATCTATTCTTAGCTATGTAGCCAATCTGACGTGGTCCATCCATTAATATAGCCTATCCTGTCTGTCAGCAGCAATCGTGATTAAACACttaaaaacaatgttgaaaaGGGGATAATGCTAGCCAACTTCGCTAGGTAGGTCTATGTTGGTTGGAGAAAAAAGTACATACTTTGTACAGTTGGCTAAACAGTGCTAAGTTTCTACCGGtagcttgcaaagtaaacattATCAGCTAACTGACAGTACATTGGCAAATGTACCTTTCTGCTGCTTGACAGGCAGACATAGGATGAACCTTAACCACTCATACTTGTCAGGTATAGTTCACTTATATTTTATATCAGTTATATCTAATTAATGGTGGCCTATATTGTGAGGCTAACCTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU792355 True 1877 lncRNA 0.37 1 30905767 30907643

Neighbor

gene id symbol gene type direction distance location
LOC118965507 LOC106569332 coding downstream 136422 30767251 ~ 30769345 (-)
LOC110529771 LOC106571665 coding downstream 218289 30529289 ~ 30687478 (-)
LOC110529226 gphn coding downstream 486155 30292451 ~ 30419612 (-)
LOC110529225 LOC106571669 coding downstream 613426 30263585 ~ 30292341 (-)
LOC100135953 LOC100135953 coding downstream 654376 30243504 ~ 30251391 (-)
LOC110529773 LOC106571662 coding upstream 4488 30912131 ~ 30989709 (-)
LOC110529774 cpsf2 coding upstream 116733 31024376 ~ 31044032 (-)
LOC110529775 LOC106571660 coding upstream 139867 31047510 ~ 31051722 (-)
trnaa-ugc-25 NA coding upstream 162700 31070343 ~ 31070417 (-)
LOC110529227 LOC106571657 coding upstream 191883 31098780 ~ 31120500 (-)
G696105 NA non-coding downstream 155 30904598 ~ 30905612 (-)
G696101 NA non-coding downstream 7373 30897492 ~ 30898394 (-)
G696069 NA non-coding downstream 57596 30847385 ~ 30848171 (-)
G696061 NA non-coding downstream 67122 30838409 ~ 30838645 (-)
G696058 NA non-coding downstream 77517 30828040 ~ 30828250 (-)
G696113 NA non-coding upstream 10417 30918060 ~ 30919501 (-)
G696114 NA non-coding upstream 13568 30921211 ~ 30921442 (-)
G696115 NA non-coding upstream 14027 30921670 ~ 30921960 (-)
G696120 NA non-coding upstream 23877 30931520 ~ 30931743 (-)
G696125 NA non-coding upstream 33539 30941182 ~ 30941389 (-)
G696073 NA other downstream 50360 30855107 ~ 30855407 (-)
G696068 NA other downstream 58558 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 843599 30001763 ~ 30062168 (-)
G693665 NA other downstream 1946935 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 2311336 28593341 ~ 28594431 (-)
G696499 NA other upstream 569711 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 750083 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 1306843 32214451 ~ 32217572 (-)
G697774 LOC106571626 other upstream 1591156 32498799 ~ 32499410 (-)
G698356 NA other upstream 2081602 32989245 ~ 32990061 (-)

Expression


Co-expression Network