G696224


Basic Information

Item Value
gene id G696224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31094348 ~ 31097930 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU792478
ATGTCTGGCCTTCAACGGTTTGTTTTACCCTGCCATCAGTGGTCAGTCTGGTACAGAACAGGGCAGGCAGCAGTAGTTGcagttggcaggtagcctagcccaGGGTCCTATTCATTGGGGCACACTAGCAAACAGCTTTAAAGCGTttttttattttagatttttttttattttttatgtattggACCAACTCCAGGTAGGGacttcctgtttcagtctgtttggtgcctaatgaacaagaCCCAGGGCTGGGTGTGTTGGGGGAAACAGTCCCATGAGCGCATAGTTTCAGAACACTTAAAACAGCTAGCTAGAGGAATGATTGGTGGCTTTTTCCTGGCCCTCTTTCTTCATCTGTTGACACTAGAAAAACCAGCTGTGTCATTGTCCGCCGAGGGGGAaaatggggaggggagaggtgggacTTCCAAAGCACTGCATGAGACGTCACCCGAGTCGACCCCTCCCTGCCCCTGGAAATGTTAGGAGTGTGTCTGTCAGCCAGGTAATTTTTCAGACAGCATCTGGAGCTCAAACTCAAGCCACTGGTATGTGTGAGTGCACATTATTGCAAATGGGCTGACTGAGTCAGTCAAAAACAGGTTTGAGCACATACCCAGAATGTAGTGGTCTCAAAGACTTGATCTCAGATCAGTTTTGCTTTTCACCTCTTAAGGTCCAGGTTAGGATTGGCGTAGGCTAAAGATGATCCCTAGATCTGTGTTTTAGGGCGAGTTTTAAGTCGAGCTGTGAATGCCACCTGCTGGTTCTCGTTAGTGTTCTAATGAGGCccccccactgggcacacacactggttgaatcaaagttgtttccacgtcatttcaatgaaaggactttgaaccaatgtggaatagatgttgaagtGGACCAGTGATGCGTGGCCAGTCAGGTGAGGAGGTTCCGTTGACCAAGGTCACGTTTCATTTTATTACAGTCATCATTTCTATTCACAAAGTTAACCCCTTCAGAAGCAAGCCTTAGTATACCCATTTTATATATTCAATTCAATAAATATACAGACATCATGGGGACGATAATGCGGAGTTCCATAGTTTGAACTTCCCAGAATCAAATAGTTTCCTATTGCTGATCAACAGTGTCGTCACATCTCCTGAATCATCTCAAATAAAGGATCTAGTGTTACAGATGAGATCCTCAAGTCAAATCAATGGAATGAAGCCAGAAAAGGTCAAAGCATGTTAATTTATAAGGGCTGTATAGGCACTGTTATTTCAATTGGTGAGGGGGCAAGGGTGTACCAGACCGCATCCTATTAACAAGCGTTCACATTGTGCACTCGTCAAAACattgtgctgtttttcagcagtTAAAATCGTACCTATTTGGCAAAGAAAACATTCATTGAGCATCAATCGTTACAAAATGAAACTTGAGGGACCGGACGTGGAGACACTGTACAGAGAAGCAGCTCATTTTGGAGGTTAATACTGAATGGAactgtgatgatgatgagggaTAGAAACACCAAAATAAGCTTGTTTTTCAGTTCCTTGCACTAAGGTCTGATATTTGTAGACTTGTTTCCCAAAATTGCCCAATTGAAACAATTATTAAATGTTTCGGGGCCAAGtcttcccctaggtacagatctgggatcagcttctcctcccccaatcctaaccttaaaggtccaatgcagccatttttatctcaatatcaaatcacttctgggtaacaattaagtaccttactgtgattctttttgaccattttaattgaaaacaaacaaaaatagcttcttagcaaagagcagtGGTctgagctgttattggcagagaggtctGAAAGTCTTATTTACTGCCTGGTAATGTCACCAGGCCAAAACGccctcccaccaaaacaggctgaattgtctgtcttttcaaacagctcttacactaaaaaaaGGCGTCACCATTTTCagaatttcacagtattattccaacctcacagTGTGGAAATACATGATAAAACACAAAAATCAAcggttttgactgcactgggcctttaaccattggtgggggaaatgcaaaactgacccaataTCAGAATCTAGGGGCAAGAGTTCACCCTCCTCCATTACTGAACACTTCATTAGAGGACAATATAGGAACGACTACCCCGTCATTTAACGCCGACCATTGATAGGTAGCCTAATACCACCAAGATCCAAAAAGTCACAAAAAGCCGTGTAAACGCTCAGTGACGGCTGGTGACAACCATTCTGAAAACAACAGGGCCTAGTAAGTGTTTCGGTCCAGCGTAAAACCATTGTAGTCTGCTTTTTTTCAGGGGAGGGGATAAATATATAGAACTTGTGGCCTAAAAATCCTGTTCTTTAGTCTCCATCTGTAGTCATTGAGAGGCAGAGTGACAAACGGGACTCTGCCTGGAGTTAGCTCCGGTCTGCCCATAGAAACAAAATCTACTCTGAGAATGCCATGGTCTGAGGGGCTTTGCCCATtctagtaattctatttctatgggtcTGCCAACGACAAGAGGGTCTTGTTGACTGATAATCCCACGTCGAGATTGAGATTTACAAAATTAAACACCAcgtaaaaaaactaacaaaaaaacAAGATCACCGAAAAAAAATACTTCTGCGACCATCAGTGCTTCTCTCGCCGTTTCATATACAAGAGTAGAGTATATAAATgtaaaatgagtaaaaaaaataataaaataaagaaatgaGTGCAATGACAAACCGTATATGCCTTTGCCCCTTTGTTTCTCTCCCAAAAGGTTACATGTCTAGCTAGCGATTCAGGAGCTCAGGACCCACTGCGACAGTCCActgtctctcggtctcgctctccCTGTGTCAGTTTAAAACCAGTCGTTTACATTGTCAGTTTGAGTTTGGCTCTGAGAGTCAAGTTAAGTCCTTGGGTAGGCAGTGTTACCACCCCTCGTGCCCATAAAAAGTGGCGCAAAAAATTGAATCTGTAGTGGTTGCTGATAAAACACACAGATGACATGAGGACAGAAAACAAATGAAAAGGCTTTTTGATTGGCAGCGGCCCTTCTCTGCTTCCAGCCTATCAGGGGTTCCAGTAAAGGTGTGGGGGGGCGGCTCTGAGGGGGTTCAGCCAATTAACTGGAGAGGGTTGTTATTGTACATCCTAGATCCAATTCTTAGGTGTAGGCCCTCACCCCCAAACTTCCATCCATCTCAGAACcagccctctcttctccctcttccgcCTTTCTTCCGTTTTACCCGAGTTCCTCATTCTCTTGCTCCGTTCTGCCCAACTTCCTTAGCTGGGCCTAGCCCTGGGCTAGATGAACTTGAAGCACTTAGTCTTGTCGTGGGGCAGACGTGTCTTGAAGAGCACAGAGTCCACGCGGAACTGTGTGTAGAGTAAGGGCATGTAGCCGTACACCTTGACAAAGAAGTTGATGCACTTGTGGCGCTCGTGGAAGTGAGAGTCGTCGTGCGACAGGGCCTGCGGGCAGCCGGGGCAGCGGAAGG

Function

NR:

description
PREDICTED: exostosin-like 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU792478 True 3505 lncRNA 0.44 2 31094348 31097930

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-25 NA coding downstream 23931 31070343 ~ 31070417 (-)
LOC110529775 LOC106571660 coding downstream 42626 31047510 ~ 31051722 (-)
LOC110529774 cpsf2 coding downstream 50316 31024376 ~ 31044032 (-)
LOC110529773 LOC106571662 coding downstream 104639 30912131 ~ 30989709 (-)
LOC118965507 LOC106569332 coding downstream 325003 30767251 ~ 30769345 (-)
LOC110529227 LOC106571657 coding upstream 1596 31098780 ~ 31120500 (-)
LOC118965648 NA coding upstream 18648 31116578 ~ 31116747 (-)
LOC110529778 LOC106571654 coding upstream 111073 31209003 ~ 31216765 (-)
zfp36l1b zfp36l1 coding upstream 194873 31292803 ~ 31298521 (-)
cgrrf1 cgrf1 coding upstream 278662 31376592 ~ 31381078 (-)
G696220 NA non-coding downstream 5254 31086494 ~ 31089094 (-)
G696189 NA non-coding downstream 58981 31034269 ~ 31035367 (-)
G696176 NA non-coding downstream 78079 31015946 ~ 31016269 (-)
G696126 NA non-coding downstream 152254 30941880 ~ 30942094 (-)
G696125 NA non-coding downstream 152959 30941182 ~ 30941389 (-)
G696289 LOC106571655 non-coding upstream 103644 31201574 ~ 31204165 (-)
G696298 NA non-coding upstream 122070 31220000 ~ 31224726 (-)
G696353 NA non-coding upstream 248030 31345960 ~ 31346302 (-)
G696073 NA other downstream 238941 30855107 ~ 30855407 (-)
G696068 NA other downstream 247139 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 1032180 30001763 ~ 30062168 (-)
G693665 NA other downstream 2135516 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 2499917 28593341 ~ 28594431 (-)
G696499 NA other upstream 379424 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 559796 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 1116556 32214451 ~ 32217572 (-)
G697774 LOC106571626 other upstream 1400869 32498799 ~ 32499410 (-)
G698356 NA other upstream 1891315 32989245 ~ 32990061 (-)

Expression


Co-expression Network