G696289 (LOC106571655)


Basic Information

Item Value
gene id G696289
gene name LOC106571655
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31201574 ~ 31204165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU792544
TGCTTTATTAGGTTAAATGAAACACAACAGAAATATAGAAACATGCGTCTTTGTGTGATAGAAACAGATTTGTGGTTGCTTGATTGGGGTGTGGGCATCTGAGGTAGAGTGGGACAGGAAAATGTCTCCAAGGGTTATAGAGCAAAAATAACATCAACGGGTAAGACTAATGTTTACATCTCAAAAGAAGTCCATCAGTAGCAAAATGATACATACTTCGACCGGTCTCTTTAAGCGCTCTGGATATTTCAAAACGgtgtcaaagcaaaaactgaaCGAATCAATGGAGCTGCACTCAAACGGGTTTAGGCTAGGGGCATTTTTGAGTAAAAACATCTCTTAGTGCTGCAACTTTAACCCATGCCCCATTGTCATACATGGTTTACTCTGCAGAAATGCAGCACAGTATTCAGTATTCAGCCTGTGATTGACAAAGAAATCTCAATGTGCAATTTTGACAGTCTTCTTTAACATTCCAACTATCTCTTTTTCGATTTGCAGATGCTCTTCACCAGACATATTTACAATGTGTTGGTGTCCACATCTGATTGAATTGTAGTCATTTCTTTACAATCATCAGTTTTATATTTTCTTTTGGAATGCAACTACAAACAAAATATGTCTTTGAACACTCAATTGTTGTAGTTGTAATTAAATATATTCATATATTTCAACAGTTACTTTAAATACTTCCTTCGTCCACATGGAGCAACTGTGGTCTCTGGTACCTCCAAATGCTATTTTATGTACCAAATGTACCAAAGGTAGCAGAGTCTTTTCCTATATTCCTCACTCATTTGGCACAGTAATGAATTGTCAATTCACCTGACCCAGACAATCTTACACGTTCATTGTAGTGATGCGAACCACACTTTTGTCAGTTTTTCACAGCTGTGGCAACAATCTGATGAATTCATGCTTAACCTACTGTATCGTCCAAATGTCCTATCAAAATGAATGTCCTTCAACTGAACGGCTAGACTCACACTAATCAATGTGTTTTGCTGGATTTACCAAGACCTCTCACCTCACATCCCACCAGGGAAAGAgatgaagaaagagaaagaacagTAAGTCAGAGGACGAGAATCCCCTCTTCTCTCAGTTCAGAAGGGTTCCATACAGCTGGGCTTTGGTGAGACTGTCCTTTCTGGAGAGTCCTAACGTGCCAAATGTTTGGTATTGCGGGGGAGCTTGCTGAGTGGTAGAGGCTGTGCTctgactcctggctgtcctccTTTCCCCGGTAGAGATGGGTCTGGTGGGCCTGCTGGCTGTGGGACGGATGGGACTGACGGAGTCCCCCCACAGGGCTACACTGGGGGCTGGGCGTGGAGAAGCACACTGGGGTTTCCATGATGGGTCCTACCCCTGCCTGGTGGTAGAAGTCTGCCCCTTCCTGGAAGCTGCTGTAGAGGGGTCCCAGGCGGATCTTGGCGGGCCGAACGGAGAAGTGCTGCTCGGAGAAGCTGTAGGGCGAGGCCCGGCCGGGCGAGTGGTACGAGTGGGCGCTTAGGTCCTCCACACTCAGCTGCCTCCAGCGACCAATCAGCTCCTCCTCCTCGGGCGCCAGTGTGCTGCCCCGGCGGCTGTCTCCATAGACGACGCTTGgcgaggaggaaggagggaggggttcGTAGGGCTCGCTGAAGCACGAGGACATGGTGCGGCTGTAGACAGGCGAGCTGCCGTTCTGGTGGTGTGCTCCGCCGGCCTGCTGGAAGACAGCGTGGACCTTGGCGAAGCCGCCCCCGCCGGGACTGTCCCTCTCCCAGGAGGAGTCACTCTTCCTCTCATAGTCTCCCCCATTCCTCCAGTCCATGTAGAGGGAGtggtggtggggagaggaggcTGTGCTGCTTGGTGGGCCGTTGCCCTTGTTGTCGTCCGAGCCCCCTCCGCTGAAGCTGGAGTAGGAGCTGCCCGAGGTGGGGCCCAGAGAGGTGGGGAACTTGGCAAAGCACTCCTGGGAGAAGCCAGACCTCAGCCCCAACAAGGGACCCTCATCTGGGTTACTATCTGTGGAGTTCTGGGGCCCGTAGAGCAGCTTTCTCTGGCCATGGAGGTCCATGCTTGGCCTGCGCTCACGGTTCTGATCGACTGGGCAGTACAGAGCTGTGTCGCTGCTGTACAGGTCTGACTTGTATGCTGCCCGGAGGCCCAGGCGCTCACCTCTGTCCAGGGTGTCCAGGAGAAAGCCTTGGTCCTGGGGCTGGGGGCTAGGCGAGCTAGAGGCTTGGCTGCCGCTGCAGGCCTCGTCGGGCTTCTCCAGCACCTTGGCGATGACGGAGGCAGGGACGGAATCGGCATAGGCAGTGTGGCAAAGAGGTGTGCCCTCCATGTGCATGGTCACGCGTTCCTGGAATTC

Function

NR:

description
brain-enriched guanylate kinase-associated protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU792544 True 2368 lncRNA 0.51 2 31201574 31204165

Neighbor

gene id symbol gene type direction distance location
LOC110529227 LOC106571657 coding downstream 81074 31098780 ~ 31120500 (-)
LOC118965648 NA coding downstream 84827 31116578 ~ 31116747 (-)
trnaa-ugc-25 NA coding downstream 131157 31070343 ~ 31070417 (-)
LOC110529775 LOC106571660 coding downstream 149852 31047510 ~ 31051722 (-)
LOC110529774 cpsf2 coding downstream 157542 31024376 ~ 31044032 (-)
LOC110529778 LOC106571654 coding upstream 4838 31209003 ~ 31216765 (-)
zfp36l1b zfp36l1 coding upstream 88638 31292803 ~ 31298521 (-)
cgrrf1 cgrf1 coding upstream 172427 31376592 ~ 31381078 (-)
LOC110529787 LOC106571648 coding upstream 224359 31428524 ~ 31431727 (-)
LOC110529789 LOC105024319 coding upstream 228227 31432392 ~ 31435370 (-)
G696224 NA non-coding downstream 103644 31094348 ~ 31097930 (-)
G696220 NA non-coding downstream 112480 31086494 ~ 31089094 (-)
G696189 NA non-coding downstream 166207 31034269 ~ 31035367 (-)
G696176 NA non-coding downstream 185305 31015946 ~ 31016269 (-)
G696298 NA non-coding upstream 15835 31220000 ~ 31224726 (-)
G696353 NA non-coding upstream 141795 31345960 ~ 31346302 (-)
G696356 NA non-coding upstream 143930 31348095 ~ 31348326 (-)
G696358 NA non-coding upstream 145432 31349597 ~ 31349864 (-)
G696073 NA other downstream 346167 30855107 ~ 30855407 (-)
G696068 NA other downstream 354365 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 1139406 30001763 ~ 30062168 (-)
G693665 NA other downstream 2242742 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 2607143 28593341 ~ 28594431 (-)
G696499 NA other upstream 273189 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 453561 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 1010321 32214451 ~ 32217572 (-)
G697774 LOC106571626 other upstream 1294634 32498799 ~ 32499410 (-)
G698356 NA other upstream 1785080 32989245 ~ 32990061 (-)

Expression


Co-expression Network