G696298


Basic Information

Item Value
gene id G696298
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31220000 ~ 31224726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU792555
GAAAATGTCATTCTTGTTATTGTTTACTAGGgttaatgttttaataaaattgttaaattcaaTCAAAAAAACGTGTAATTTTGGTATAGAACTTTTGTTTGTGTATTTGGCAATGTTACGTtctccagtttctgtgttgtagtttgtgtatttgcatgtgtgtatttcaggaaatcgcttcctgaaatccctcaagcagctgattggtcgactccatggctaattggagagctgaccccgccccctcgtcaagacgcagctgtctccaattacccattccttctgaagctatataaaagccagtgttctgttcagaagAGAGATCATTGCTAGGAGGAGATTGCAGAAAGATTGAGTGTGGTATAGAGAATTCAATTGCTGAGAGCTGTGTTGGTTGTTTCTCAGAAAGTGATTTGGTATATACTATGTTAGATGTTGCTGAGGGAGTTGATTGGTTATGTCTGGTATGTGTCAATAGGATGCACTGTTTTGATTATTTGAATTGTTTATCCTGTTGTTCCCAGGGGgtgaaggcacctagggagtgcttaggcaagaggcccgtgggcatacatatacccgtagtatattcactgtctaggcacactaggtaagacctgggcggaccaccccctcgTATTTTGGAAAACTGTCAAGCTTGCTCATCTCCTTTTCTCTAAGGTTCTTTAATTGCATCAGCTCTTTGGTGCATTTAATGGTTACCACTGACTTTATATTTGAACAATTCCCATCTACTTCCATGACCCATGAAGTCTTTCCTTGCAAAAATATCTTTAGCTAATGatttgatgttttcaatgagagtAGCATCTTTAAGAAGTGtttaatttccaatatcctcgagTGTAcctttttgatttttttttagtAGCTTGTAAATTCAGGGAAATCAATTTGATCAGAAAAGGGAGCCAACTGATCTACATCTATAACAAAAAAGGGGAAATTAGGAATAAATATATTCTAGATTTACGTGAGTTTTGTTGGTCCAGGTATGCCTGAAATAATGCCAGGCATCCTCAACACAGATCCTTGCATAATGTTATGAGGGTTTTGACTCGTTCTAGGAGGAAAACGATCAGATGCATCAGGTGTTTCATTAAAATCCCCTGAAATAATTCGAAAAGCCTCTTGAGTATTTGCTTACATCCTGCGCTTTCCTGGTAAATTGGGTAAAAATGGTCTTATTAGGAGGTGAGTTATGTCCGTATACATTAGATTATGAAAATGGCATTGTCAAGTTTAACAGTTACTATAACCCATCTGCCGTTTGTGAAGATGTAGATTCTAGAATGTCACATTTAAACCTGTGAATAAGTGTCAAAACACCAGAAGAATGAGTTGATCCATGACTGAAATAGGCCATCTCCCCATTGTGCTTTCCAAAATGTAAAATCACTTTCACCCGAATGAGTTTCCTGAAGGACAAAATCTGCGTTTACAGTATAAAAACTTTACTTTTTGTAGGATTCTTCAAACCCCTAGCATTCAGACTAACGATATTGAGTGAATTGAAAAGGAACTCCTGCATTAAAAAATAACACAGATAACACAAGTAttaatgtgaacaataaaacagTGAACCTTGAGGATTACTCCGACGGAAAACTACGCTCAGCTGAGGTAGCGGTGGTTAACAGAATAACAAATCAATTTACTTTTCTTTGGCAAGTGTTCATCAGTTGTAGTTCGAACAGTACATTTATTTGTGGCAGTACATTAACTGTACTCATGGTAGTACTCACAGTTCCAATTTGGTTAATGTCAACAGTACCCAGTAATCATTCTTCCTTCGATTAACGCGTGTGGGCCCTTGAACCCAAGGTGGCGTCGCTCTTCAAAGCAACATTGAGGGTTAGGTGGTTAACAGTTAAATATTGGCTCTTAATATTGAAAGAAACTAACTCTACCTTGTTTTATGGATATGGGATAAGTTTAGATTTAGTTTTTGTCAAGTTGAATGGGAAGAACACGACAAAGACAAGAGTAGACGAAATATCCGAAGACGGCAGACATGCTAGCTAGCCACAACGAGAACCAGAGCAGCATGGATACACAAGAAGCCGCAAACTCAAGCAATAGAAAGAACACAACTGACCAGGATAATCCTTGCAACCTCTTTACCTCAGACCCCAAGTTAAAATCCATCGGTGAAAAAAGTAAAAGAAGACATTTCCATGTCGGAACTTTTCTCTGCAATCCGGTCCCTGTCTACAAAACAAGACGCCACGCTCTCCAAAGTGTCCATCATAGAGTGGGCTACCGAAGAAACATCGAAGATCGATAATTTGTCAGAAACTGTCAAATCAACTCCACAAAATTCTGAGCGAGAACAAGGAAAATATAACGTTCCTAGAGATTGAGGTGAAGAAAATGCAATCCAAAAATAATGAGCTGTGTGAGAATGTAGCTGAACTTCAAAGGTACTCTCGCAGGTGGAATCTGAAAATCCAAGGTGTAAAAGAGGTATAGAGGGAATTAGAGAAGTAGTCATTAATATCCTGGGAAAAGTGGCTCCGTGCATCAAAGACAGGCTAAGAGACGTGATTGATGTGGTACATCGGCTTGGGAAACGAAGATTTGATGGACCCCCGCGCAATATCATCTTGCTCTTAACTATGCGCCATTACAGGGACATCATATAGAAAATGGCCAAGGGGAACAAGTTTCTGGCCGAGAAGAAGCTCCGCATCAAAGAAGCTCTGATACCGCAGGATCAGGCTACCAGAGAGAAGCTGTGGCCGCTTATACAGAAGGCACGACAAGAGACACAACACACGTGTCTGGCTGCAAAGGTGCATTGTGAGCGACGTCAGCAGTATGCGCTCAGCTCGTGCACAGGCAGCAGAAGGCCAGCAgaaatttcagcaaattgcaaatcattgttggctgactgcagcagTACTTCGGGTTCGACGAGCCAAACCCaattaatatagttggtcacgaatgtttgatcttgaacagaacttacaacatcaatcaacatgtcTCAATCAAAATTGTACAGCCATAAGTACAGAAAAGAGTGGGAGTCTGTCTGTACCTGAACAAATGTCAAGTCATATTTTTTGCAACAAATATtttagcaacaaatcaacctgcctctagcaacttaccatgaaaatgagttggcaacactgaccacaacatctattttctgtgacttatgttccatctctgcagtacagttgataaccattgctatgaacACTAAGAAACCCACCTTACTGAAACATATGTAACTcattggcctatccctctgttcTGGCACAGATCTACTATTGACAGGGATCCTCTCAGAATCCCTCACCCTTAATCCaccctctactttcttcactgcctcaacaTACGACTTCTTCTTCACTACTCTGACCCTGGCCACCTTAACCTGCCTTTCTCGCACCGGACACCTccgatccccagcaacatgggtACCCCTACAGTTGACACACACAACTTTTCCCACCAAAACTACACATTCCTCTGTCCCATGTCCTCCTGCACACTTTCTacatcttggaatctccctcctacacactgctgcgaCACACCCGTAAACGTAGCACCTATAACACCGCAGTATATTCGGCACAAAAGCTCTAACAGAATAACTCATATATCGTGACATTACTTTGTCAGGTAAAGACTGAATCAAAGCTCAAAAGAACAGACTGTTTCACCACGCTCCCCACCGGATCTGCGTCGCACTAGATGGCGGGCGTCACAAACACCACGAATCTTCCTCTTAAATTGCTTAACCTCCACACTTAACGCTACCCCAGAAATCCCTCCCGTCAATGGTGCCTTGTACCTAAACACAAAGCAAGATACAGATCTTTCCCCGAGTTGCGTTGCACGGAGCACCTGCTCCCTCTGATCACAAACATCACAAGTCCAATTTGGGTTACCTTCACCGACTCAACAGCACCCACCATCTATTCCACCCAACCTGAAACCACCCATGCATCAGCCAAAAGTCCTGGTTCCACCCTCTTCAAAAATATCTCTCGCACTGGACCAAACTTATCTTTATCATAACCATGTCCATCAATGCAAGGCTCGGGCGCCAAGCTCCTCACAACACCTTCTACCCTTTCCATTTCACCTCCAGAACTTAAACTGTCATCCAGCTCACTCTGTTTGAACTTGACACCAATCTTCCCCGTTGTTATTACTGGCTTCAACAGATTCACACCCatcctctgcctccctcagtcttTTCAACCtccgctctctttccctccaatCCTCCTCCCTTAACCAATTACCCAACTCCTTCTGAAAATATTAAACTTTTCCAAGCCTTCATCTCTTTTTAGCCTCCTCGAGAGACATGTTAAGCCCTGTACTCCGTCCACTTCAAACTCGTCTGACATATACCGCCACTTCGCTTTGGATTTTGGTAAATGTAGTCATATGGGACTGTCAAAACCACTGCACTGGGTCCCGATGCAGTCTTTTTTTTAGGCCTGGGTCAGCTTGATGCATTTCTCATGAAGAATCAatagaaaacaaaacacattctttcaaataaaatatattgaaCATTTTGTGCTATTGTGATGTGGTGAGACTGTAAAatagacagcagcagcagcaaacaTCACGACTTGAAGCAGTCTCACAGGGCTGTGTGATGAAATTCCAATCTCAAATAAATGACACCTTGCTTATCggctctctttttccctctccctttttcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107689943

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU792555 True 4727 lncRNA 0.42 1 31220000 31224726

Neighbor

gene id symbol gene type direction distance location
LOC110529778 LOC106571654 coding downstream 3235 31209003 ~ 31216765 (-)
LOC110529227 LOC106571657 coding downstream 99500 31098780 ~ 31120500 (-)
LOC118965648 NA coding downstream 103253 31116578 ~ 31116747 (-)
trnaa-ugc-25 NA coding downstream 149583 31070343 ~ 31070417 (-)
LOC110529775 LOC106571660 coding downstream 168278 31047510 ~ 31051722 (-)
zfp36l1b zfp36l1 coding upstream 68077 31292803 ~ 31298521 (-)
cgrrf1 cgrf1 coding upstream 151866 31376592 ~ 31381078 (-)
LOC110529787 LOC106571648 coding upstream 203798 31428524 ~ 31431727 (-)
LOC110529789 LOC105024319 coding upstream 207666 31432392 ~ 31435370 (-)
LOC110529790 LOC106571645 coding upstream 228608 31453334 ~ 31458247 (-)
G696289 LOC106571655 non-coding downstream 15835 31201574 ~ 31204165 (-)
G696224 NA non-coding downstream 122070 31094348 ~ 31097930 (-)
G696220 NA non-coding downstream 130906 31086494 ~ 31089094 (-)
G696353 NA non-coding upstream 121234 31345960 ~ 31346302 (-)
G696356 NA non-coding upstream 123369 31348095 ~ 31348326 (-)
G696358 NA non-coding upstream 124871 31349597 ~ 31349864 (-)
G696359 NA non-coding upstream 126016 31350742 ~ 31351338 (-)
G696365 NA non-coding upstream 129473 31354199 ~ 31354532 (-)
G696073 NA other downstream 364593 30855107 ~ 30855407 (-)
G696068 NA other downstream 372791 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 1157832 30001763 ~ 30062168 (-)
G693665 NA other downstream 2261168 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 2625569 28593341 ~ 28594431 (-)
G696499 NA other upstream 252628 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 433000 31657632 ~ 31703525 (-)
LOC110529804 ypel5 other upstream 989760 32214451 ~ 32217572 (-)
G697774 LOC106571626 other upstream 1274073 32498799 ~ 32499410 (-)
G698356 NA other upstream 1764519 32989245 ~ 32990061 (-)

Expression


Co-expression Network