G697221 (ypel5)


Basic Information

Item Value
gene id G697221
gene name ypel5
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32214449 ~ 32217565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU793530
GATTTCATATGATCAATTTCTTTATTATAATCCATCACCCGGAGGCCTGAAAGAAAAAAACAGTAGCTTTAACTCAACTCCTACTTAGTTTTCCAGGCTTTCTCACAATTTAATTTTGTTCCAATAGCTGAGTGATGAACGAggattggaaggatggcatcgcAAGACTATGCAACCCAAAAAGAAAACACAGCACTGACCAATCCTAATACAGAACTTAACCACAATATTGTCAACAATGCCGGTTCATGGTTTTTTTTGGTCACATTTACACAATGGTCAAGTTGTCTTTTGATAATTGTTACACAATTGTCAGCATTTGAGGTTGATCACAGGTTCTATTGTCTAGGCGTCCATTGGCAGACATGAGGCTTTAGTACACACATGCATTTGTCATCGGGATCAAAGTGAGGGTTGACATCAGTTTCATAATGTGCAAACAGTCAACTAAAATCAGCACTATCAAATCTAATATTTGTTAATAAAAGCAAATGGAAACTGGGTTTAATGACAATATTCAGAAAGATAATTTCCTCAAATCAATTTTCACACCCATTCTCACTAAAACTTAAATAATATTTCATCCTAAACACAAGCatcactcaccccccccccccccaagctctCACGCAACAGCGGTTTTATCATACACAGCTGTATCACTGACAAAGACATTAGCATCTGTCCATGCTCTCCACTTTGGGTCATTAAGTTACTCCCCCCACCACAACCCCTACTCTTCAGGCAGTTGTAGTCCAATGTATACACATGTATCGTGCAGAATCTTATGCATGTACATTATATGCATTATAAGCACTATAGCCTGTGAGCGAGTGCAttctcaaatgttgtgtacaaTATGTGTGAGGGGCGGACATAATTACAGGCTTGTCTAGCTCGACACAATTCTTGCTGGTGGGAAGCTGATACACAGGTAGTTGCCTATAAGGAGAGGAGTGTAGGGGACACTGGGGATTGGGAGAGATGTTGGGTGCACAAGGCAGAAAGGAGGGACGGGGGACTCAGGAGTTATCAGAGGGCACATGCTCCTCGAAGCCCTCGCTCTCCCTTACTAGCGCCCTTTCGAGGATGACGCGGCCTTCCTTGTAGCGCTGACTGTCTTCTGTGGCAAACTCGTAGATCCAGCCCAGCTTGCTGTTGCAGTTCTTGCAGCTGACGTCTCGCACCATGTGTCTGCCCGTCAGCATCACACGGTCCTGCACCTCGCTGTACTGCAGGTTCACCACCTTGTTGAAGAGGAAGGCTCGGCCCGTGGCGCCAGTGAAGCGCGTGGAGATGAGCTCAGAGCGGTTGGTCAGGATGGTGTCACAGTTGGCGCAGGAGAAGAGGCGGGTCCCGCCGATGTGGTCCAGGAAGATCCGGCCCATAGTGCTGTTGTAAGCAGAGACCGACCTTGAATCTGTAATTTTCAGAGTTCTGTCGACACGAATGTTAATAACCTGTTTTCTTGACCACTTCTATAGTCTTTATCAACCTCGAATCcagttttgttgttgtattttcacCTTCTTTTCGTCCTTCTCGTCGATTCTGTAGCTAGAAGTGGCGTCAGCTTTGTTGTTCTCTCACAGCTGTTCCGCAGACTGTATCAACATCC

Function

symbol description
ypel5 Predicted to enable metal ion binding activity. Predicted to be part of ubiquitin ligase complex. Orthologous to human YPEL5 (yippee like 5).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU793530 True 1618 lncRNA 0.45 3 32214449 32217565

Neighbor

gene id symbol gene type direction distance location
LOC110529803 LOC106571638 coding upstream 362 32194207 ~ 32214087 (+)
LOC110529801 LOC106571636 coding upstream 20745 32172212 ~ 32193704 (+)
LOC110529799 LOC106571639 coding upstream 48381 32163321 ~ 32166068 (+)
LOC110529798 LOC106571640 coding upstream 58199 32152701 ~ 32156250 (+)
LOC118965508 NA coding upstream 73067 32135196 ~ 32141382 (+)
LOC110529802 ppp1cb coding downstream 38753 32256318 ~ 32268368 (+)
grcc10 cssa15h12orf57 coding downstream 69599 32287164 ~ 32289011 (+)
LOC110529813 LOC106571626 coding downstream 277864 32495429 ~ 32503490 (+)
LOC110529231 LOC106571626 coding downstream 285573 32503138 ~ 32516734 (+)
LOC110529815 LOC106571624 coding downstream 322693 32540258 ~ 32544145 (+)
G697217 NA non-coding upstream 45653 32168580 ~ 32168796 (+)
G697215 NA non-coding upstream 46778 32167455 ~ 32167671 (+)
G697214 NA non-coding upstream 47111 32167111 ~ 32167338 (+)
G697204 NA non-coding upstream 66483 32147566 ~ 32147966 (+)
G697242 NA non-coding downstream 7124 32224689 ~ 32225047 (+)
G697260 NA non-coding downstream 66717 32284282 ~ 32284505 (+)
G697270 NA non-coding downstream 86331 32303896 ~ 32304102 (+)
G697280 NA non-coding downstream 103875 32321440 ~ 32322745 (+)
G697281 NA non-coding downstream 105201 32322766 ~ 32323116 (+)
G694036 NA other upstream 2421702 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 3276176 28930668 ~ 28939888 (+)
G693207 NA other upstream 3508697 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 3656076 28495104 ~ 28605625 (+)
G692424 NA other upstream 4144221 28069900 ~ 28070228 (+)
G699605 NA other downstream 1910028 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 3237283 35454437 ~ 35462086 (+)
G700685 NA other downstream 3395599 35613164 ~ 35614666 (+)
G700864 NA other downstream 3686484 35904049 ~ 35904698 (+)
G702415 NA other downstream 4482873 36700438 ~ 36700739 (+)

Expression


Co-expression Network