G697644


Basic Information

Item Value
gene id G697644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32303157 ~ 32305119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU793984
GGGTTTGATTCCACCTCCTTTCTGTATTTTTGAGTGTACAGTTTAGACAGACATGAAGCCATTTATTGGAGCCGTTTATTGGTTGAAGCCGTTTATTGGAGATGATACACGGGCATACTGCCTGTATCGTAAGGCTGATTTCTACACCAAACTTAgtgatgtaaaaaaacacaaCTCAAAAACATACTCAAAAGCCAAAGCCTTATAACAGTTCCACCCAAAACAAGCTGCCATTTATGGTTAAAAAAGTTTACTCTCCAAAAAAGGCTGAGGCCACCATGGCATTAGCTATCGCTGAACACTGTTCCATGCTGGCATGTGATCACATTGGAGAAGCATGTAGAGCTGCTTTCTCAGACTCCACTGCTGCTACCCACTTCAAAATGCACACGACAAAGTGCACAGAAATTATTAACGGTGTTCTAGCACCATACTTTCTGAAAAAGATGGTCGCAGATGTGGGTGACCGGTGCTTCAGCCTCCTCCTTGATGAGTCCACGGATGTTAAGTGTTTCTAAgtacctgggggttgtgataaggtactttagtgacaccaagcagacaattgtatcaacatttctggggcttgttgagttggagggaggagatgccAAATCTATAGCCCGTGCTGTTATGGCTTTCCTCGAGAAGTGTTGTCTTAAAAAAGAGAAACTCCTGGGGATAGGGACTGACAATGCCTCTGTTATGATGGGGATTAACAATGGGGTCCATAAGTGCTGAAGGAGGAGTATGGCCTCAAAAATCTGGTTCTTATTCGCTGTGTGTGCCACTCTCTGCAGCTTgctcatttgtagttctaaacatgtttagggtgtttttaactcactttttgtctctcccacgatgttattcctctctcctacagtgtCCATCACAATGACATGCACATGACCCATTATGCAAATTAGGCGAttagccaatagctactttccttactgaggagttggcaacactgcggAGGCCCCCCTCTGGCTCCGGTCTGACCCTgcccctgcctctcctctgctGCAGCACGCTTTCTACCTATTTGGGTCCCCCTCTTTTCTTTAATCCGCGTTGATCCATTACGTCTGTCGCATAAAATGGCCTATGTGTCTTTCCTTCTTTTTGACAGTTGTGTTGTCTGTCTTTTTATTCTCCAGTAACAGTTACGTTACTATAGTCCTCCAGCTCCGACAATAGTTTTTTTTCCGAAGCGGAGAAACGGTTACTTTTTTGAAGTGCCATGATCAGGTGGCTAACGGACAAATCATAAGTGGATAAATAACATTAAGTAGTGACAATAATAAATCATATTTTATGCTATCTAACTTGGTttataaactagctagctacatgagctaacattagctaacgaATTAGTTTTCTGTCTAGTACTGGCAAATAATGgattttatttcaaatcaaacaACCCATGAGAATCTTTCACGATGGAGTTGCAGTAGTTCTAATGTTACATTGTTATTATTTTATCAAGGAACAGCAACTTTCTGGCCTCATTTGTCAAATTGGCTAGCTACTCCGTTTCAACTCACAAAATACCTCTTATATTGGTGTAACATGTCACTAATCATAGTTTAAAACCGGTAATCATAGATTTACTGATCCAGATTTAAAATTAAGTGGTGCGACACATCTTTGATGAATTATAAACATAGATTTACAAAACCTAGATTAGCTCTAATCCTAGATAAATTTAAAACATGTTGGTGCAACCCACCCTTAGATttattcttccactttgacattagtgcgtattttgtgtagatcattgacaaaaacatgacaatgaaatccattttaatcccacttgtaacacaacaaaatgtggaaaaagtcaaggggtgagaatactttctgaaggcactgtagacgtTAAAATGCCTAATGCCTATATAATGCCTATAGGTTTTTTAGGTTGTGAAGGTGGGGACCCCTGGAG

Function

NR:

description
uncharacterized protein LOC110527132

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU793984 True 1963 lncRNA 0.41 1 32303157 32305119

Neighbor

gene id symbol gene type direction distance location
LOC110529806 LOC106571627 coding downstream 1864 32289064 ~ 32301293 (-)
LOC110529808 LOC106571628 coding downstream 15988 32286058 ~ 32287169 (-)
bpnt1 bpnt1 coding downstream 24923 32269095 ~ 32278234 (-)
LOC110529804 ypel5 coding downstream 85585 32214451 ~ 32217572 (-)
LOC110529796 LOC106571727 coding downstream 167963 32132683 ~ 32135194 (-)
LOC110529812 LOC106571726 coding upstream 1023 32306142 ~ 32322140 (-)
LOC118965610 NA coding upstream 112353 32417472 ~ 32421085 (-)
LOC110531086 LOC106571620 coding upstream 258012 32563131 ~ 32569877 (-)
cep43 LOC106571617 coding upstream 264897 32570016 ~ 32589888 (-)
myt1la LOC106571614 coding upstream 285179 32590298 ~ 32638849 (-)
G697643 NA non-coding downstream 76 32302870 ~ 32303081 (-)
G697642 NA non-coding downstream 18028 32284890 ~ 32285129 (-)
G697632 ppp1cb non-coding downstream 34554 32255521 ~ 32268603 (-)
G697604 NA non-coding downstream 78344 32224607 ~ 32224813 (-)
G697561 NA non-coding downstream 143109 32159223 ~ 32160048 (-)
G697649 NA non-coding upstream 19692 32324811 ~ 32325062 (-)
G697651 NA non-coding upstream 23699 32328818 ~ 32330202 (-)
G697671 NA non-coding upstream 59366 32364485 ~ 32364689 (-)
G697672 NA non-coding upstream 59801 32364920 ~ 32365217 (-)
G697683 NA non-coding upstream 79234 32384353 ~ 32384604 (-)
LOC110529793 LOC106571728 other downstream 623422 31657632 ~ 31703525 (-)
G696499 NA other downstream 825130 31477354 ~ 31478027 (-)
G696073 NA other downstream 1447750 30855107 ~ 30855407 (-)
G696068 NA other downstream 1455948 30846902 ~ 30847209 (-)
G697774 LOC106571626 other upstream 193680 32498799 ~ 32499410 (-)
G698356 NA other upstream 684126 32989245 ~ 32990061 (-)
G699468 NA other upstream 1637903 33943022 ~ 33952356 (-)
ankef1a LOC106571587 other upstream 1718172 34017010 ~ 34029131 (-)
G701454 NA other upstream 3277879 35582998 ~ 35589877 (-)

Expression


Co-expression Network