XLOC_026163


Basic Information

Item Value
gene id XLOC_026163
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 11491443 ~ 11510052 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052962
CGCATATGTACAGTACAGTGGATAGATAAAAAAAGAATGATTGTCTGTGGTTGGGCCTCTGTTATCAGTCCCGTCAGACCAAAGTACTCTTTTTCTCTGTGCCTGGAGGATCGTAAGAGGTCACCATCTTGTTTTGGTCCCAGCGGGCATTGGCGGGCGAGTTCTGCATGACCACCAGCCGGATGGGCGCCGGGTTGACGTTGGGCACGGGGTCAGGTGCATACTCCTTGGTGGGATCTTTTCCCTGGCAGTCGTAGAGGATGCAGGAGATGAGGAAGACGAGGAGGAGGATGACATAGCTGGCGATCAGGATGATGAGGTTGAGGGTGACCGGGTCGATCTCCACATCGTCCGCGATGAAGCTCATGGTGGCGCCGATGATGATGGTGAGACCTGCAGGACGGAGACTGAGCCGGTGCGGGTGGAGTGTGTCCTGTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052962 True 439 lncRNA 0.56 2 11491443 11510052

Neighbor

gene id symbol gene type direction distance location
XLOC_026162 AL935044.3 coding downstream 90143 11397269 ~ 11401300 (-)
XLOC_026161 AL935044.1 coding downstream 118008 11371786 ~ 11373435 (-)
XLOC_026160 AL935044.4 coding downstream 129060 11358518 ~ 11362383 (-)
XLOC_026159 AL935044.2 coding downstream 168711 11306799 ~ 11322732 (-)
XLOC_026158 NA coding downstream 187515 11298792 ~ 11303928 (-)
XLOC_026164 NA coding upstream 66602 11576654 ~ 11580720 (-)
XLOC_026165 hlfa coding upstream 75246 11585298 ~ 11624694 (-)
XLOC_026166 NA coding upstream 193857 11703909 ~ 11717849 (-)
XLOC_026167 FOXK2 coding upstream 269637 11779689 ~ 11828206 (-)
XLOC_026168 coro7 coding upstream 357649 11867701 ~ 11922713 (-)
XLOC_026157 NA non-coding downstream 237576 11253472 ~ 11253867 (-)
XLOC_026153 NA non-coding downstream 442252 11018469 ~ 11049191 (-)
XLOC_026171 NA non-coding upstream 601108 12111160 ~ 12113782 (-)
XLOC_026175 NA non-coding upstream 845480 12355532 ~ 12358516 (-)
XLOC_026177 NA non-coding upstream 1319144 12829196 ~ 12849611 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000173_00275950_00276243 NA coding CI01000173 null 271961 ~ 276405 (+)