G697302


Basic Information

Item Value
gene id G697302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32517225 ~ 32518147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU793616
ggtggagtgctgcagcgaTTGTTGTACTTTTGGAAGGTCTCCCATCTCtgcaaaggaactctggagctctgtcagagtgaccatcgggtttttggtcacctccctgaccaaaacccttctccccaatttctcagtttggcagagtggccagctctaggaagagtcttggtggttccaaacttcttccatttaagagtgatggaggccactgtgttcttggggaccttcaatgctgcagaaatgttttggtatccttccccagatctgtgcttcgacacaatcctgtcttggagctcttcagacaattccttcgacctcatggcttggtttttgctttgacatgcactgtcaactgtgggaccttatgtagacagttatgtgcctttccaaatcatgtcatatcaattgaatttaccacaggtggactccaatcaagttgtagaaacatctcaagaatgataaatggaaacaggatgcaactgagctcaattttgaatctcatagcaaagggtctgaatacttatgttaaggtatttcagtttttttatatatatacattttcctAAATTTCAAAAagtctgttttcgctttgtaattatggggtattatgtttaCATTACTACGGCTTGTTtttatttaaaccattttagaataaggctgtaacgttaacaaaatgtggaaaaagtgaaggggtctgaatactttctgaaggcactgtaactcaactatatgGACATTCGGGGCAGATGTGCATTCATTGTTCACATTGACAGTCGTTGTGTTTTTAGCCTTTAAAAGCCAATACAACTTTCCCAGGGAAAAGAAAGGGCGCCATTTACCTGtgcaattttttatttttgctaAATGTTTTGCGAGGGGAGATAGCTTTCACTGTATGTTTACCTATGGTGAAGAATTTATTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU793616 True 923 lncRNA 0.40 1 32517225 32518147
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529231 LOC106571626 coding upstream 491 32503138 ~ 32516734 (+)
LOC110529813 LOC106571626 coding upstream 13735 32495429 ~ 32503490 (+)
grcc10 cssa15h12orf57 coding upstream 228214 32287164 ~ 32289011 (+)
LOC110529802 ppp1cb coding upstream 248857 32256318 ~ 32268368 (+)
LOC110529800 LOC106571632 coding upstream 261387 32216576 ~ 32255838 (+)
LOC110529815 LOC106571624 coding downstream 22111 32540258 ~ 32544145 (+)
rps7 LOC106608110 coding downstream 164285 32682432 ~ 32686606 (+)
LOC118965652 NA coding downstream 165552 32683699 ~ 32683923 (+)
LOC118965651 NA coding downstream 166558 32684705 ~ 32684929 (+)
LOC118965649 NA coding downstream 167083 32685230 ~ 32685454 (+)
G697404 NA non-coding upstream 9697 32507327 ~ 32507528 (+)
G697401 NA non-coding upstream 15377 32501455 ~ 32501848 (+)
G697393 NA non-coding upstream 28105 32488895 ~ 32489120 (+)
G697392 NA non-coding upstream 28434 32488469 ~ 32488791 (+)
G697385 NA non-coding upstream 42473 32474512 ~ 32474752 (+)
G697782 NA non-coding downstream 1749 32519896 ~ 32520152 (+)
G697788 NA non-coding downstream 5482 32523629 ~ 32523852 (+)
G697794 NA non-coding downstream 7408 32525555 ~ 32525776 (+)
G697800 NA non-coding downstream 10989 32529136 ~ 32529469 (+)
G697808 NA non-coding downstream 14717 32532864 ~ 32533166 (+)
G694036 NA other upstream 2724478 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 3578952 28930668 ~ 28939888 (+)
G693207 NA other upstream 3811473 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 3958852 28495104 ~ 28605625 (+)
G692424 NA other upstream 4446997 28069900 ~ 28070228 (+)
G699605 NA other downstream 1609446 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 2936701 35454437 ~ 35462086 (+)
G700685 NA other downstream 3095017 35613164 ~ 35614666 (+)
G700864 NA other downstream 3385902 35904049 ~ 35904698 (+)
G702415 NA other downstream 4182291 36700438 ~ 36700739 (+)

Expression

G697302 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G697302 Expression in each Bioproject

Bar chart with 16 bars.
G697302 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G253914 NA unknown CI01000059 null 4753538 ~ 4754082 (-)