G697966


Basic Information

Item Value
gene id G697966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32581758 ~ 32582960 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU794342
GCGGAGTAAAAAACTCCTAattatcagcttccattcagtcagctCATAAAACTGCTTCTCCAGGACACATATATCCACTCCTTTCTTGaaacattcatacagtatcttaACAGCATTTATATCTACTATAGACatgttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtgattaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacagtggtgaacttataggtcttcagtgtgtgacagattagtacagtggtgaacctataggtcttcagggtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtaacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtct
>TU794343
gtgttacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacagtggtgaactTATAggtaggtcttcagtgtgtgacatgttagtacagtggtgaacctataggtcttcagtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtgattaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacagtggtgaacttataggtcttcagtgtgtgacagattagtacagtggtgaacctataggtcttcagggtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtaacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtct

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU794342 False 531 lncRNA 0.42 3 32581758 32582960
TU794343 True 649 lncRNA 0.44 2 32581758 32582792

Neighbor

gene id symbol gene type direction distance location
LOC110531086 LOC106571620 coding downstream 11881 32563131 ~ 32569877 (-)
LOC118965610 NA coding downstream 160673 32417472 ~ 32421085 (-)
LOC110529812 LOC106571726 coding downstream 259618 32306142 ~ 32322140 (-)
LOC110529806 LOC106571627 coding downstream 280465 32289064 ~ 32301293 (-)
LOC110529808 LOC106571628 coding downstream 294589 32286058 ~ 32287169 (-)
myt1la LOC106571614 coding upstream 7338 32590298 ~ 32638849 (-)
LOC110529818 rnaseh1 coding upstream 87785 32670745 ~ 32682526 (-)
LOC110529821 LOC106571616 coding upstream 394836 32977796 ~ 33011990 (-)
LOC110529232 NA coding upstream 808017 33390977 ~ 33405852 (-)
LOC110529824 NA coding upstream 826843 33409803 ~ 33413009 (-)
G697807 NA non-coding downstream 49919 32531613 ~ 32531839 (-)
G697803 NA non-coding downstream 51768 32529632 ~ 32529990 (-)
G697781 NA non-coding downstream 62984 32511605 ~ 32518774 (-)
G697780 NA non-coding downstream 72452 32509091 ~ 32509306 (-)
G697773 NA non-coding downstream 83788 32497732 ~ 32497970 (-)
G697992 NA non-coding upstream 81988 32664948 ~ 32665251 (-)
G697993 NA non-coding upstream 82659 32665619 ~ 32665846 (-)
G697956 NA non-coding upstream 101827 32684787 ~ 32687854 (-)
G698000 allc non-coding upstream 109002 32691962 ~ 32692607 (-)
G698076 NA non-coding upstream 206049 32789009 ~ 32789408 (-)
G697774 LOC106571626 other downstream 82348 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 364209 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 902023 31657632 ~ 31703525 (-)
G696499 NA other downstream 1103731 31477354 ~ 31478027 (-)
G696073 NA other downstream 1726351 30855107 ~ 30855407 (-)
G698356 NA other upstream 406285 32989245 ~ 32990061 (-)
G699468 NA other upstream 1360062 33943022 ~ 33952356 (-)
ankef1a LOC106571587 other upstream 1440331 34017010 ~ 34029131 (-)
G701454 NA other upstream 3000038 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 3058395 35633473 ~ 35705333 (-)

Expression


Co-expression Network