G697956


Basic Information

Item Value
gene id G697956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32684787 ~ 32687854 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU794326
TCTCCGTGTTTATATAGTGACGGCAGGGCTAGGTGAATAGATCATGGAAGACTTAAGGTGAAAAACCTTAGTGAATAAAGATGCTCAAACAAGCAACTGCATCAGTATTGGGCGTTCCAACTCTAAAATGCACGACTTAAAACAAAAACCGGGAAATGCATGTGGTCTAAATAGTGACATTGGGGCTAATTCAAACTGCAGTCGGATGTTCTCACAGGTGAGCGATTCAGCCCATGCTTGGTGAATAGCACTTGGTTTATCTCTGGGAGCAGGACACATAAACAAGATTATGCGCGACAAAAGTGagaatgaataaataaatcacaGCAAAGGAATGTAGTCTGTAAACTAGAAAATTAAACACGCTGCAAACATCCTACTCCCATTGATAGGATTAAAGTGGCATTCGCCAGTATGAATGACATTTGTGGGTCCTGCCTTTGACTATTAGATTTACACTTGTCCTATACATGTTTGTAGCCTTAATTTGCTTAGAATAACCTTAAACGCTAAATCTCTCCTAGTCCCAGAATGACTAGATAGCTCACATCTgttcatgctagctagcaacagatCCTGTTGCAACTACAGTAGCTAGCCACATTAAAAGGTTGCCGTGTTCAGCTGTCATTTCACAGCTTGGAATGATGGTATCACATATTacaaataaataccttatttgaTAGCATTTTGTCAGATGGAGATCCCTCTCGCTGTCACCAGCTTTCTACTTACTACCTAAAATGCACATGTGATTGGTGTTCAGAGATTCTACACAATTTGATTGGTTCAGTTTAAAACTTGGCAGCAATTACCTGTCCTGCTAGCGAACATAAGTATTTTGAAGAAATGTGCAAGAGTTGACATTGCCAAATGGAAATGTGTTGAGCAGAAATACACTATGTAAAAACCAGCTCCTCCCTCGACAGCGATCTTTCTCACCAACTAAAGCAAATGGCTTGAGCCCACCACCAGAATACATTGACAAATTGACTAATCTATTTCATTCTGCATCAGTGAATGTGCAAAAACACATTGTGAATACTACCATTTCATGGAGGTACAAAAGCAAGTCTGAACAAACCCTCTTAGCAGTTGTTAGATGTCAATTATCAAAGCTGCACAAAGTGTAGTTATGAGGTAACATTCCTACTGTTTTGGATATGAAGTTATTTCTGTCTGAAAGGCCATCAGCCTTGAACATGTATGGACTAGCATGactaacccccccacccccagagaACAGAGTTAACAgtaaacacatttattttgtcaTCTGCACTTTACAGTTGGAATTCGGGGAACTCAAAAACAACATCTTTGCCTGTAAGCTTCTTGTAGACGCCAGAGAAGGTCTCACTTTGTGTTCAACGTTGTTCTGCTGAGCCTTGTCAAGGTGGACCTTGATGAGCCGACTGCTGTCCAGTTTCACGCGGATCCTCTTGCCAACAATTTCACTGGGGAAGACCAGGTCTTCAAGTATGGCATCATGCACAGCTGTCAGAGTACGGCTGGAGAAATAAATCAATTTGCATTAGACATAtggcaaataaaaaaaaatgcaatccTTATAAAAACAATTCTCCTACCACCTGCCTCATTCAAAATTACAGATTCTTTATACGTCTGAACGCATGTATTGGAAAGAGAAAGTAAATCTAAACGCTATGCAGATGTCTCAATCACATCACTGGAGACAAGCAGAGTCTGCTTTAGATAACGCAAGGTAATAAGAGTGAACGTTGATTTTGCATCATACGGTTAGTCTCCGGGTCATCTTGTAACCGTATCGATTTATTCAAAATCCCATTCGAAGTTTCAAGTTGTCACATTCTGAAGTAGAGAAGCGCCTTTCTCgcgagctctttcccaacaacgcAATAACAAATATCAGTATTACAAATAAAGATCAAAAACACACGAGAAAATACAAGCTATATACTGGGTACGTTTCagggtcagtgccaataccatatttacaatgtgcaggttTACTGGAGTGGTAGAAACCATATACAACATGTTAGTAAAATTGTACACTGCATGGTTTAGCCCCCCAGTCATGGCCCAAAGGGCTCTGGGAAGATGTAGGAATATACAGAACACCGTCCTCACCAGCCCGAGGGCCGGGGACAAAGCTTGCTCTCCAACGTCGTGGAACGGGACTGTACGTCACAGCACTGTGAAGCGCTACGCTCCCATACGCCACAAGGACAGAGCCATGTGAGAGCAACCTCACAGGATGTCCACGTTGGGTCCAAAATTGGCGAGCAATTATGGCAGCACCAAATATGACAGAAACAATTTGAAGTTTAAAACTAGTACCCATTCCCACCAACTTTAAAGCCATTTAATTGTCTCTTCCAAACAGTATGTAGTCGTGCACATGCAGGTATGATAATGTAACTCACCTCCTGGGACGCTTCTGCTTATTCTTGATACGGCTTTTCCTGGTTGGTTTGGGCAGGATTCTCCTCTGCAAGTTTAATGAAAATATTAAGGATTACTAATTTACATAGGCAGACTTTAAAAGCCCAAGAAGCATACTTGATAACTAATGTACACTGCATGGTTTAGCCCCCCAGTCACGGCCCAAAGGGCTCTGGGAAGATGTAGGAATATACAGAACACCGCCCTCACCAGCCCAAGGGCCGGGGACAAAGCTTGCTCTCCAACGTCGTGGAACGGGACTGTACGT

Function

NR:

description
40S ribosomal protein S7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU794326 True 2698 lncRNA 0.42 2 32684787 32687854

Neighbor

gene id symbol gene type direction distance location
LOC110529818 rnaseh1 coding downstream 2261 32670745 ~ 32682526 (-)
myt1la LOC106571614 coding downstream 45938 32590298 ~ 32638849 (-)
cep43 LOC106571617 coding downstream 94899 32570016 ~ 32589888 (-)
LOC110531086 LOC106571620 coding downstream 114910 32563131 ~ 32569877 (-)
LOC118965610 NA coding downstream 263702 32417472 ~ 32421085 (-)
LOC110529821 LOC106571616 coding upstream 289942 32977796 ~ 33011990 (-)
LOC110529232 NA coding upstream 703123 33390977 ~ 33405852 (-)
LOC110529824 NA coding upstream 721949 33409803 ~ 33413009 (-)
LOC118965663 NA coding upstream 723012 33410866 ~ 33411152 (-)
ints9 ints9 coding upstream 738663 33426517 ~ 33435877 (-)
G697993 NA non-coding downstream 18941 32665619 ~ 32665846 (-)
G697992 NA non-coding downstream 19536 32664948 ~ 32665251 (-)
G697966 NA non-coding downstream 101827 32581758 ~ 32582960 (-)
G697807 NA non-coding downstream 152948 32531613 ~ 32531839 (-)
G697803 NA non-coding downstream 154797 32529632 ~ 32529990 (-)
G698000 allc non-coding upstream 4108 32691962 ~ 32692607 (-)
G698076 NA non-coding upstream 101155 32789009 ~ 32789408 (-)
G698081 NA non-coding upstream 102633 32790487 ~ 32790714 (-)
G698102 NA non-coding upstream 117569 32805423 ~ 32805629 (-)
G698226 NA non-coding upstream 176513 32864367 ~ 32864740 (-)
G697774 LOC106571626 other downstream 185377 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 467238 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 1005052 31657632 ~ 31703525 (-)
G696499 NA other downstream 1206760 31477354 ~ 31478027 (-)
G696073 NA other downstream 1829380 30855107 ~ 30855407 (-)
G698356 NA other upstream 301391 32989245 ~ 32990061 (-)
G699468 NA other upstream 1255168 33943022 ~ 33952356 (-)
ankef1a LOC106571587 other upstream 1335437 34017010 ~ 34029131 (-)
G701454 NA other upstream 2895144 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 2953501 35633473 ~ 35705333 (-)

Expression


Co-expression Network