Gene
RNA
| Item | Value |
|---|---|
| gene id | G698000 |
| gene name | allc |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 32691962 ~ 32692607 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| allc | Predicted to enable allantoicase activity. Predicted to be involved in allantoin catabolic process. Predicted to act upstream of or within purine nucleobase metabolic process. Orthologous to human ALLC (allantoicase). |
| description |
|---|
| probable allantoicase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU794379 | True | 443 | lncRNA | 0.40 | 3 | 32691962 | 32692607 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529818 | rnaseh1 | coding | downstream | 9436 | 32670745 ~ 32682526 (-) |
| myt1la | LOC106571614 | coding | downstream | 53113 | 32590298 ~ 32638849 (-) |
| cep43 | LOC106571617 | coding | downstream | 102074 | 32570016 ~ 32589888 (-) |
| LOC110531086 | LOC106571620 | coding | downstream | 122085 | 32563131 ~ 32569877 (-) |
| LOC118965610 | NA | coding | downstream | 270877 | 32417472 ~ 32421085 (-) |
| LOC110529821 | LOC106571616 | coding | upstream | 285189 | 32977796 ~ 33011990 (-) |
| LOC110529232 | NA | coding | upstream | 698370 | 33390977 ~ 33405852 (-) |
| LOC110529824 | NA | coding | upstream | 717196 | 33409803 ~ 33413009 (-) |
| LOC118965663 | NA | coding | upstream | 718259 | 33410866 ~ 33411152 (-) |
| ints9 | ints9 | coding | upstream | 733910 | 33426517 ~ 33435877 (-) |
| G697956 | NA | non-coding | downstream | 4108 | 32684787 ~ 32687854 (-) |
| G697993 | NA | non-coding | downstream | 26116 | 32665619 ~ 32665846 (-) |
| G697992 | NA | non-coding | downstream | 26711 | 32664948 ~ 32665251 (-) |
| G697966 | NA | non-coding | downstream | 109002 | 32581758 ~ 32582960 (-) |
| G697807 | NA | non-coding | downstream | 160123 | 32531613 ~ 32531839 (-) |
| G698076 | NA | non-coding | upstream | 96402 | 32789009 ~ 32789408 (-) |
| G698081 | NA | non-coding | upstream | 97880 | 32790487 ~ 32790714 (-) |
| G698102 | NA | non-coding | upstream | 112816 | 32805423 ~ 32805629 (-) |
| G698226 | NA | non-coding | upstream | 171760 | 32864367 ~ 32864740 (-) |
| G698269 | NA | non-coding | upstream | 237631 | 32930238 ~ 32930531 (-) |
| G697774 | LOC106571626 | other | downstream | 192552 | 32498799 ~ 32499410 (-) |
| LOC110529804 | ypel5 | other | downstream | 474413 | 32214451 ~ 32217572 (-) |
| LOC110529793 | LOC106571728 | other | downstream | 1012227 | 31657632 ~ 31703525 (-) |
| G696499 | NA | other | downstream | 1213935 | 31477354 ~ 31478027 (-) |
| G696073 | NA | other | downstream | 1836555 | 30855107 ~ 30855407 (-) |
| G698356 | NA | other | upstream | 296638 | 32989245 ~ 32990061 (-) |
| G699468 | NA | other | upstream | 1250415 | 33943022 ~ 33952356 (-) |
| ankef1a | LOC106571587 | other | upstream | 1330684 | 34017010 ~ 34029131 (-) |
| G701454 | NA | other | upstream | 2890391 | 35582998 ~ 35589877 (-) |
| LOC110529865 | LOC106571568 | other | upstream | 2948748 | 35633473 ~ 35705333 (-) |
