G698986


Basic Information

Item Value
gene id G698986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33421436 ~ 33424015 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU795397
GTTGTAAAATATTTAATTGATCAAATACATATATcctttaaatgtaaaatatattaaatatacaGTGTACTACATGAGCATTAGATAATACATGTATGTAAGCAGCAGGTGAAAATGTATTGATTGTCATGAAGTAGGGCCCTGTTTTGAATACATTAAAAAGTGTAACCTCCCGTACTTCATTCCTTCCTTGACATGACTACTGAGTTGACAAATTAGACAAGACAAAAAGCAAGGTACCCATCACATTACTTTTCCCTTCTCTAATTAAATACCGGTAAGTGAACATCTTGAGGAAGAAAGAAAAGAGGAAGTGGATTATTGCGTTTGAGCGGACCTACAAATGCTTCAGTGAAAATAAGCGTGAGATACTATATTTGAAAActtaacatatacagtgccttcagaaagtattcatacctctcgacttattccaaattttgttacagcccgaattcaaaatggattttaGTTTTTTCCCCTttaaccatctacacacaataccccataatgacaaagtgaaaacatgtttttagaaaatgtattgaatatgaaatgcagaaatctcatttacacaagtattcacaccagAGTCAATACGTCTTAGTATcatctttgcacacctggattggtcAATAATGGCACATTAATCTTTTAAAAATTCTtccagctctgtcaagttggttgttgatcattactagacagccatgttcaagtcttgccatagattttgaagcctatttaagtcaaaactgtaaataGGCCATACAGGATCATTCAATGTGGTCTTGGTAAGCaaatccagtgtatatttggcctcgtgttttagggtactgtcctgctgaaagatgaatttgcctcccagtgtctgttggaaagcagactaaaccagatTTTACTCTCAAATTTTGCATGTGTTTAGCTCTACTGTTTATTTTTTACCTTAAAACTCCCTCGTCCTtgacgatgacaagcatacccataacatgatgcagagaccaccatgcttgaaaatatgaagagtggtactcagtgatttgTTGTGCTTGCCcgaaacataacattttgtattcaggatatTTCCTGACCAGTTATtgaagttttactttagtgccttattgcaaacaggatgcatgttttggaatatttgtattcggTACAGGCTTCCCCTTTTCACCATGGCATTTAggctagtattgtggagtaaagacaatgttgttgatccatcctcagtagctgagttaggaaggaccctgtatctttgtagtgactgggagtATCGATATACCATCCAacatgtaattaataacttcaccatgctcaaaggaatattcaatgtctgtgttaacattttttttacccatcaTAGGTACCATTCTTTGcagggcattggaaaacctccctggccattgtggttgaatctgtgtttgaaattcactgctcgactgagggaccttacagataattgtgtgttagaagtacagagatgaggtcgtCATTCAAagatcatgttaaacaccattgTTACACACAGTGAGTCAATGCAACCGAATAAATGTTttactcctgaatgtatttaggcttaccatgaaggggttgaatacatttcagcttttcattttgaattattttgtaaaaatgtctaaaaacataattccactttgacattatggtgtattgtgtgtaatcCAGTGATACAAAatcttaatttaatccattttaaattcagtcggTAACAACTAAATGTAGaaaaaagtcgaggggtgtggatactttctgaaggcactgtacaggcaGTGGGTTTTGGAGGTATCATATGGGTGTTGGTTTGACATCTCATATCCTAGTCACCTGAGGGCAGTTTGTTCTTCAGCAGGTTCTATAGTATCACACACACCTTCTTATAGGGCTTGTGGAAGGGACACTGGGGCTCAGCCACCACTTCAAATGCCCAATCCCAAATCAACCCTTAGCCCCTATCCCCCTAGGCTCTTGTGTAGATCTGAAATTACTGGACATGTTGCTTAGtgtttaagagcgttgggccagaaaccgaaaggttgcttgttTGAATCCCTGACTCAACTTggtgaaaaagagtgtctgctaaatgactaaaatgtatgtAACAACATTCGAATAGCTCTACCTTGCCAATGTCTTTGGAGAACTTTCACAATGTGGCTTACAAGGTGGAGCGTCCCCTATATGGCTTACAAGTATATCTAACCAATTTTCTCAGATCTACACAAGTGCAGGGTTAACGGGCCTAAAAGTCAACCAGAGACTGGACAATACAGTCCACCTCTAGCTTTCTCTGGACTGGACATCGACTGACGGGTTTGTCTACTTGGATTCCTTTTCGGCGTCCACCAGTGCAGAGCGGATCCCCAGCTTCTGGAGCTCCTCTACCAGGTCTCCGTTCTGGTGCATCTGTAGGAAGATGTCACAGCCGCCCACAAACTCGCCATTTAAGAAGATCTGTGGGATTGTGGGCCAGTTGGAGAAGTCCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU795397 True 2514 lncRNA 0.39 2 33421436 33424015
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529824 NA coding downstream 8427 33409803 ~ 33413009 (-)
LOC118965663 NA coding downstream 10284 33410866 ~ 33411152 (-)
LOC110529232 NA coding downstream 15584 33390977 ~ 33405852 (-)
LOC110529821 LOC106571616 coding downstream 409446 32977796 ~ 33011990 (-)
LOC110529818 rnaseh1 coding downstream 738910 32670745 ~ 32682526 (-)
ints9 ints9 coding upstream 2502 33426517 ~ 33435877 (-)
LOC110529827 LOC106606921 coding upstream 30272 33454287 ~ 33458472 (-)
LOC110529828 LOC106571602 coding upstream 60786 33484801 ~ 33549308 (-)
LOC110529832 fbxo16 coding upstream 261354 33685369 ~ 33689052 (-)
cdc42bpab LOC106571585 coding upstream 295359 33719374 ~ 33822238 (-)
G698742 NA non-coding downstream 146484 33274665 ~ 33274952 (-)
G698729 NA non-coding downstream 154287 33266871 ~ 33267149 (-)
G698663 NA non-coding downstream 206467 33214729 ~ 33214969 (-)
G698474 NA non-coding downstream 332828 33088396 ~ 33088608 (-)
G699093 NA non-coding upstream 162404 33586419 ~ 33586673 (-)
G699309 NA non-coding upstream 197663 33621678 ~ 33622113 (-)
G699311 NA non-coding upstream 202224 33626239 ~ 33626569 (-)
G699323 NA non-coding upstream 223421 33647436 ~ 33647645 (-)
G699324 NA non-coding upstream 223693 33647708 ~ 33647983 (-)
G698356 NA other downstream 431375 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 922026 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 1203887 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 1741701 31657632 ~ 31703525 (-)
G696499 NA other downstream 1943409 31477354 ~ 31478027 (-)
G699468 NA other upstream 519007 33943022 ~ 33952356 (-)
ankef1a LOC106571587 other upstream 599276 34017010 ~ 34029131 (-)
G701454 NA other upstream 2158983 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 2217340 35633473 ~ 35705333 (-)
G701618 LOC106571560 other upstream 2476608 35900623 ~ 35918175 (-)

Expression

G698986 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
End of interactive chart.

G698986 Expression in each Bioproject

Bar chart with 15 bars.
G698986 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network