G699319


Basic Information

Item Value
gene id G699319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33680741 ~ 33683970 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU795760
GGTGCAGAAAATGTACCAGTTTAATTTTCGGTTCACACATCCATTCAATATAAAGCAAAAGCCATTTATAAGAAACATTGAACCAACGTTCCAAACCATTAAAAAGTATTGTCAGTTAAAGCAAATCCAACTACTATTCAAATATCTCAATATTCAACACAGCTTGCATACAacacacaataataataataataataataacaacaacatgtattgTGCTGAAGACATTGTGTAGTTCAATACTGATAGAAGTTTGATGGAAATCTTTTTTTGGAATTAAACCTTCGAAACATCCTCAGTATATGGCTTGTATGGTGCACATTTAGCTTGACATTTGACAGGTCCACCACATACAGTATTCATCCATTGCATATATACATTGCATCCATCACACACAAAAAGTATGGCTCACACTTGTCAAAGTGCATTATGGATCACCAGACAATATAGAAAATAAACAATTAACATGAATGTCAAAATCCGTGGAGGTTATGACCTGTTTCATTTTTTTCTTAAACGTTTGTTAGTAGCATTGCATGTTATCACGATGAGTAATGTTACAGAGATGCATTGAGTAAGGATTTTAGTGAAGCTTGGATGGACAAACAGATATTCACTGTGTGGATTTTAAAACTCTATAATAGCCCTTCGTCTCATTTCACATTAACACTGTGGATCCTAATAATTTACTGTAGAATTACATACACTTAATTCATAATTCTCTGAGGTCGGTGACTATTGCTGACTTCGGGACAAGAAAAGGCACAAGACAGGCTACTTCAGTCTAGCATAAAAAGCCCATTGACGGTTGTAGGGTTGTGGGTTTCTCTAATAAGGAAAATATGAACAGGACACATTTGTAAAGGCTTGGCCATTGTTTAGTAGCCCGAGTGCCCGTCTGTGCCATCATGCCAACTCCCTGCCACTCATTGTCAAGTGaaatgtttggcttgacaatgacctCATGCCAGTTGGCAggagcacaaactgatctgggaccaggctaattgTTTGCATGCTGCTCAACATGACATAGGCCAATTAGGCTGCGTTAACACCAGCAGACCAAATCTAATCTTTTTCCActaaattggtcttttgaccaaatCAGCTCTATTGCCAATAATTGAGCAAaacatcagaattgggctgcctgtgtaaacagccATAGTCTAAAATGGTTTCATCTCTGCATTTCCCTATCATAAAAAAAAAAGCTTCAATTCCACATACGTCTGGACAGACAGGATCGAGACAGCAGCACAACAAGTTAACGCAGATTTTCTTCcaagtcattaaaaaaaataaaaaatcaataaCAAGCGATTGTGACCTTTACCAAACAACCGTTTCTCCAATTCCATAGAACACCACATATTTCCAGAACAAAAGCCACTCACAATCCTGACATTTTGTAGATAACTTTCCAATATCGTTCTCCTGTTAATAATTAGATGAATATTATTCACCACTGAACCAAGTCAAAAAGATAGACATCAGTGTATACATGCTGATTGAGCTTTGAGAATACTCCTATAATGCCCCTTTGGTCAATGTTCATTAGCATGAAAcaatgctgcacacacacacaaactactcAAAAAAAGGGCAACACAAATTACACAGGGGTCAACACCAGTCTGAAATTGACATATTTAATCAATCATCAAACCAAGATATGGAGTGTAGATTTAATCTTGGAGTGCCTCCAAACAAAATCAGTGACACAAATATATTTGCACATTCGGATGTACGTAAGAGTATAGGAGCGAGCGACAAGGCCTTATTCGACAGAATGGTACTTTGTGTGTACTGAAATGATGACTGCTGCGAGTACATTTTTCAACGCTTACACCAACGGTGAGGGAACGAGTACACTTCAGGTAGGAGGATAGAGAATGGGACCACAGTCAGACGGAGGCGTTACTCGTCCTTAAAGAGGATAAAGGAGAACAACTAGGAGAAAAGGCTCACCAGAATCACCGCTATCCTACTACCAGAGTAGAGATCTAAAAAAAGGAAGGAATTGTTTTTGCCACTGCGTGTCACTTCAAAAATAACCATGACTTAATTTGTATTGAAAGCTGCTTCTTTGAGCAATGGACTTCTGTTAGATACAAAAAGGAACACACCTGATacatgaaaaataaagaaaactaaaCGACATactgtatcctcatcctcctgCCACACAGGCTCAAacatttGGTTGATTGGTTTATTTCTTATGGCACCGTCACTTCCTTGCCAACGAAGCACAACAACGTCCGCCAACTTACCGAAACCACTTCAAAATGAAAGCCATCACCCCCCACCGATGCTTCCCCTCGCTAAATTCCAAACCAACCTCTAGTCCCTACaggcactcctgtagatctgataGGTTTGAACAATCTTCCCCTTGCCTTCTGATAGACTAGGTGGAATTTGCGCCATATTGCTTACACCCATCCAATCATCCCGATCTACAGAGATGGATAAGGATTGGGTAGCATGGTCTCAGGTCAGTTTGTGCCGTCCTGCCAACATTGAACCACCACAGGCGTTAGGAAGACAGCGCAAAGTGATCTGGGACCCGGTTCGACATCAATTCGGAATTCAGCTTCTGTTGACAACGAACCACCAATGAAGCTCCTTTCATTCGCCCGCTCCCTCATAGGAACCAACCGGAGTGcttgtttcttcaagtgctgctTGCCAAGCTCAGTTCGTAAGGCTGAAAGGTATATCCACAATTTGTGCTTCCAACAAAAATTACAGTATAGCCAACTCATTTTTCAAAGTAAAAGGTACATGTTCTATATGTTTCAGTAAGTTGGAGGGAATGACTATGTAAATACACAAGTATTAACATCCAGTCTTTTAAATTATGTAAACAtatacatcttttttttttttgaggtcagtACATTGACCCTCTTTCGATAGAAATGTTACTGAAGCATCGTTCGGATGTTTTTTGGAGTGGACTCGTCATTCAGGTGTTTAGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU795760 True 2993 lncRNA 0.39 2 33680741 33683970

Neighbor

gene id symbol gene type direction distance location
LOC110529828 LOC106571602 coding downstream 131433 33484801 ~ 33549308 (-)
LOC110529827 LOC106606921 coding downstream 222269 33454287 ~ 33458472 (-)
ints9 ints9 coding downstream 244864 33426517 ~ 33435877 (-)
LOC110529824 NA coding downstream 267732 33409803 ~ 33413009 (-)
LOC110529832 fbxo16 coding upstream 1399 33685369 ~ 33689052 (-)
cdc42bpab LOC106571585 coding upstream 35404 33719374 ~ 33822238 (-)
LOC110529836 LOC106571586 coding upstream 147702 33831672 ~ 33841602 (-)
LOC110529840 LOC106571603 coding upstream 291518 33975488 ~ 34009377 (-)
ankef1a LOC106571587 coding upstream 333040 34017010 ~ 34029131 (-)
G699326 NA non-coding downstream 30912 33649603 ~ 33649829 (-)
G699324 NA non-coding downstream 32758 33647708 ~ 33647983 (-)
G699323 NA non-coding downstream 33096 33647436 ~ 33647645 (-)
G699311 NA non-coding downstream 54172 33626239 ~ 33626569 (-)
G699309 NA non-coding downstream 58628 33621678 ~ 33622113 (-)
G699381 NA non-coding upstream 73804 33757774 ~ 33788417 (-)
G699427 NA non-coding upstream 140103 33824073 ~ 33824422 (-)
G699429 NA non-coding upstream 142449 33826419 ~ 33826658 (-)
G699430 LOC106571598 non-coding upstream 143790 33827760 ~ 33827995 (-)
G699431 LOC106571598 non-coding upstream 144154 33828124 ~ 33828678 (-)
G698356 NA other downstream 690680 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 1181331 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 1463192 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 2001006 31657632 ~ 31703525 (-)
G696499 NA other downstream 2202714 31477354 ~ 31478027 (-)
G699468 NA other upstream 259052 33943022 ~ 33952356 (-)
G701454 NA other upstream 1899028 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 1957385 35633473 ~ 35705333 (-)
G701618 LOC106571560 other upstream 2216653 35900623 ~ 35918175 (-)

Expression


Co-expression Network