G699157


Basic Information

Item Value
gene id G699157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33707557 ~ 33759358 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU795580
atactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcaattttcagttctttccagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaatacaaatctccatcccagtctcatgtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccgccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccatatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttccataaaggccagatttgtgcaatttacgattgattgttgtcctatgaacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggttgatttgcagtggtctgatactccttccatttcaatattatcgcttgcaaagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacactggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttgtatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU795580 True 1359 lncRNA 0.42 2 33707557 33759358

Neighbor

gene id symbol gene type direction distance location
LOC110529830 LOC106571599 coding upstream 26720 33656633 ~ 33680837 (+)
sf3b6 sf3b6 coding upstream 223153 33480209 ~ 33484404 (+)
LOC118965509 LOC106571610 coding upstream 254337 33446421 ~ 33453220 (+)
LOC110529826 LOC106571610 coding upstream 261925 33436288 ~ 33445632 (+)
LOC110529823 LOC106571612 coding upstream 283537 33411718 ~ 33424020 (+)
LOC110529835 LOC106571598 coding downstream 63713 33823071 ~ 33828774 (+)
LOC110529837 LOC106571584 coding downstream 91278 33850636 ~ 33886984 (+)
LOC110529839 LOC106571597 coding downstream 130395 33889753 ~ 33908455 (+)
LOC118965510 LOC106571597 coding downstream 150395 33909753 ~ 33941058 (+)
LOC118965511 LOC106571597 coding downstream 160893 33920251 ~ 33930473 (+)
G699114 NA non-coding upstream 22325 33684127 ~ 33685232 (+)
G699141 NA non-coding upstream 52049 33655157 ~ 33655508 (+)
G699133 NA non-coding upstream 64231 33643118 ~ 33643326 (+)
G699121 NA non-coding upstream 81430 33625872 ~ 33626127 (+)
G699117 NA non-coding upstream 86801 33620550 ~ 33620756 (+)
G699189 LOC106571586 non-coding downstream 75014 33834372 ~ 33836476 (+)
G699239 NA non-coding downstream 101290 33860648 ~ 33860875 (+)
G699240 NA non-coding downstream 103165 33862523 ~ 33862765 (+)
G699250 NA non-coding downstream 122514 33881872 ~ 33882170 (+)
G699251 NA non-coding downstream 127801 33887159 ~ 33887513 (+)
G694036 NA other upstream 3914810 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 4769284 28930668 ~ 28939888 (+)
G693207 NA other upstream 5001805 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 5149184 28495104 ~ 28605625 (+)
G692424 NA other upstream 5637329 28069900 ~ 28070228 (+)
G699605 NA other downstream 368235 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 1695490 35454437 ~ 35462086 (+)
G700685 NA other downstream 1853806 35613164 ~ 35614666 (+)
G700864 NA other downstream 2144691 35904049 ~ 35904698 (+)
G702415 NA other downstream 2941080 36700438 ~ 36700739 (+)

Expression


Co-expression Network