G699456


Basic Information

Item Value
gene id G699456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33883703 ~ 33886933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU795905
ccaaaatatcatgcaaaacaggcaacaacaaaatAATATGTATTTAGATAAACAAGTGAGGCTCAGAACAGTtggccccacctgccctgaatgacgggccACCACTGGTTCTTCTAGCCTACTCCCATATGCTTGATACATCTGGTAGTCCTTAGGGCCCTCTGTCCCATGTACAATTGATTATTTCAaaatatgtacagtatagccttTGTGCATATGTAGACAATATTTCTAGAACTGGACATTCAAAGTCTGAAATCCAACAGACACAGTGGGTTCATAGAAAGATACGTTGAGAAATTTTTATTGTGACCAAGTGGTGACACGTCAAACACGGGCAGACCCAGAGCTGAGTAGTATTTACCCTTTGAATTCCCTCTTCCCTTCTGCCCTTTCTAAATATGAAAAAACATTTGTCCTGCTCACATCTGCATTGTTATCTTTGGGATGATTTGTAATGAGTCCTAAATGGCTGTGAAGTAGAGCAGAAAGAGGGAAATGCTGGGATGGGGAGCGAtccagggagtgtgtgtgtgtaatgagtcTGACTTTTCGAAGTGAACTCCAGCTGACTGCGCATCCTCATTAACTTCCCACTAGAAAACATTTGTAGCGACATCCACTAATGGCTAAGCTGCTTGCAACATATAACAATAATGTGGCTTAAACTTAACATCGTGCAATTGACTCAAATAGACTGTTAAACCCTGTAGATATGAAAGGAACATATACACTCAGTTTAACCAATGTAGTAATTGCATCGtcttctgataggctaggtgGAATTCTTTGCCATACTGCTTGGACCTATTCAGGCTTTTCAGATCCACGGGACAGACGGAGTGCATGGGggagcctggtcccagatctgtttgtgtggtCTTGCCAACTCCTTCCAGATCACAGGAGGTTGGAGGCACCTTCATTAGGGagaacaggctcgtggtaatgactggagcggaattagtggaatggtatcaaatacagaaaacacattgtttccaggtgtttgatgccattccatttgctccgttccggccattattatgagacgttctctcctcagcagcctccactgttagGGATTAAACCGATGTTGGACCAAGCTAGTCTAGGGGGGTAGGAGCTAGAGCTCCGTTTGGGATTCAGTGTTACTGTCGTTCTCTGTGATAGTGTTTTGTCACCCTTCTCAAACGACTGTTTAAAACAGTGTACTCTGTGTTGGCATTAATAACAACACAAGCCAAGCCTCCAGCTCTCACACGAAGTCATTAGACTCGGGTGAACGAACAAAACACAAGGGGTACACAACCACTTTAGGACAGTTTATCCTTTGTCATTGAAGTTAAAGGATACAGTAGGGGGCTACACAGCAATACCATAATAAATACAGAGAAATATGAAGACGCAGGTTATAAAGACTTGACATACGACATGCTGATACTGTAAATAGGATTCATAAAACGGACatcatggagtgtgtgtgtgtgtgtgtgtgcgtgtgcgtgtgcgtgtgtgcgtgtgtgtgtgtgcgtgcgtgcgtgtgtgtgtgtgtgagtgtatgttaAAAATGTAACACTCATATAcgttagataagtattcaccccctgactaaatacatgttagaaacaactttggcagtgattacaaagGTGAGTCAGCTTGGcttagtctctaagagctttgcacacctgaattgtgcaatatttccccattattattttcaaaattattcaagctctgtcaaggtgttggcTACACAGCAAAAGttgtatcctgaaaaactccctagtctttgCCAATGTCAAGTATCCCCGGGtgataccatgatgcagccaacgCTGTGCTTGAatataaggaggcagttacttagtgatgtgttgtgttgaatttgccccaaacataaggctttgcatttaagCCAAAAAAGGGTATTCCTTTACAATCACCAATGTCCTTATGGTGACATCCCTGAGCAGgttcattcctgtcctgcagctcagttcagaaggacgactgtatctttgATGGGTCTGAGTGGtttaatatataatccacagcataattattaacttgaccatgcttaaagagatactcaatgtctgatttgttattgttacccatctaccaatcactacCCTTCTTTACGAGGCTTTTGAAAAGCTTGCTGGaatttgtagttgaatctgtgcttgaaatgaaTACTTGACTGagtgaccttacagatgttgtatgtatgggggacagaggaaggggtagtaAGTATCCTTACCTTGTGCGAGACGAAACAGCTCATAGGGCAGGACCCTATCTTCTGTTTCTATAGCGTGAGGCCACTGAGTTGGTACACAGGAaggggtagtcattaaaaaatcatgtcaaTTCCTCTTTCGCACATAGTGTGTCCATGTATTTTATGTGATTTGTTGTGCCAAATTTGACTACTGAACTCATTTAGGCTTACCTAAACAAAGGGGGGGAATACTTATGCAActatatttaatttaatttaatttgtattcatttgtaaacatttgcacttttttcttttcactttgacattatggattATTTTGTGTAAATCAGTTAATtccatttcaatcccactttgtaatgtaacaaaaggtGGAATAAAATTCAAGGGGGCGAATACTTCTGATACCCACTGTAACGGTGAATATTGACCTGTATCGTGTGTCAGAAGAACATGCACCATTCGGAGTGAGAGTGCTCTGTGGTATTCAGAGATGCTGATTCCACTCCCTCTTATTCAGGAGAAGTCAACACTGAGTGATACTTCTCACTACTGTTAGGGAGTTGAAATACAAATACCTGTGTATGTTTTCAAGTGGAATTCAGATAAGCATAAAAAGATGGTGGTATTCCATTAttggccttctctctctctctctctctctgtacatctatttttctctttctttgtAAATCTCTCTCTTTGTACATCTATTAACAACAATGGGAACAAAATGACACTAAATTCCCATGAATCCTTGCTGCTGTTCCGTCCGACGGCGTCTCCGCGCTTGCCGCCGCTTGGTGGCGACGTCGAAGCACGTGACCATCATGACGTTGGCCTTGCAGAGGTTGACCTTGCTCTCCAGCCTCGCCGTGACCACCTCTAACGCTTCCAGGTGTTCCAGGGAGTCAACCTCAAACGTCTGCCACAGGTCAa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU795905 True 3193 lncRNA 0.42 2 33883703 33886933

Neighbor

gene id symbol gene type direction distance location
LOC110529836 LOC106571586 coding downstream 42101 33831672 ~ 33841602 (-)
cdc42bpab LOC106571585 coding downstream 61465 33719374 ~ 33822238 (-)
LOC110529832 fbxo16 coding downstream 194651 33685369 ~ 33689052 (-)
LOC110529828 LOC106571602 coding downstream 334395 33484801 ~ 33549308 (-)
LOC110529827 LOC106606921 coding downstream 425231 33454287 ~ 33458472 (-)
LOC110529840 LOC106571603 coding upstream 88555 33975488 ~ 34009377 (-)
ankef1a LOC106571587 coding upstream 130077 34017010 ~ 34029131 (-)
LOC110529846 LOC106571592 coding upstream 249625 34136558 ~ 34157637 (-)
LOC110529843 LOC105030678 coding upstream 368582 34255515 ~ 34257262 (-)
LOC110529848 LOC106571583 coding upstream 658223 34545156 ~ 34550128 (-)
G699451 NA non-coding downstream 11586 33871902 ~ 33872117 (-)
G699450 NA non-coding downstream 11844 33871655 ~ 33871859 (-)
G699445 LOC106571584 non-coding downstream 15481 33867743 ~ 33868222 (-)
G699443 LOC106571584 non-coding downstream 22218 33861265 ~ 33861485 (-)
G699436 NA non-coding downstream 32814 33850635 ~ 33850889 (-)
G699457 NA non-coding upstream 580 33887513 ~ 33887789 (-)
G699469 NA non-coding upstream 57950 33944883 ~ 33945878 (-)
G699474 NA non-coding upstream 65740 33952673 ~ 33955182 (-)
G699476 NA non-coding upstream 68644 33955577 ~ 33955914 (-)
G699479 NA non-coding upstream 71638 33958571 ~ 33958856 (-)
G698356 NA other downstream 893642 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 1384293 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 1666154 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 2203968 31657632 ~ 31703525 (-)
G696499 NA other downstream 2405676 31477354 ~ 31478027 (-)
G699468 NA other upstream 56089 33943022 ~ 33952356 (-)
G701454 NA other upstream 1696065 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 1754422 35633473 ~ 35705333 (-)
G701618 LOC106571560 other upstream 2013690 35900623 ~ 35918175 (-)

Expression


Co-expression Network