G699474


Basic Information

Item Value
gene id G699474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33952673 ~ 33955182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU795925
tgcgTCTTTATTAAATCAATaacttattttttacattgtttccTCACTGAtttgtgacatgtattaatgccaaaataacatgcaaaacaggccccacctgccctgaatgatgggtcaccactgagagagagaggacagagagagacagcaagaggatgaaagaaagaaatagaaAGAGATAGCGGGGAGGAGAGATAAGGTAAACAGAAAgtcagaggagaaagaaaggaagaacaGAAAAGacaagagagaaagggagcgagagataGTTAAATAGAGAGTGAATGCAGGGCTGGGAGCACCCGATAGGTGTTTTGCTCAGCAGCCCACTCTAAACATCATGCCTAACTGGTAGGGTGGAGGCTGTTTGCTGGACTGAGGAAGGGATCAGTCAGAAGAggggaggataagagaggagatggagagtgggagagagcaaAGGAGAAGTGAAGAGGAGACAAGACAGCAGGAGAGGATTGAGTAGAAAGGTGATTGAAGAGGGGATGAAGAgatgaggggaaaggagagggagacggaAGAGGGGATGAAGAgatgaggggaaaggagagggagagagcatgaatAACATCACACCCACGATGGCTGGATgtggggtagggagaggagagcagggaagaGGGATGGGGCTCCTGTAGCCTATGTGCATAGGGAAACAGACCACTGCATCCTCCTGTcttgctctccttctccctttccctgTTCGTTTCCTCAGCAACACGTATAGCTATGCTATGCACCCTGTACTTAACCACGCTACTTAACAATTACTCTCCCACAGTTTTATGATTGAACAAACCTGTCTATTTCCCTCTGTATCACTACAGTAGAACGAGaacactgctctctctgtctctctctctgtaatgctCTGCTAACAGAGTTGTTGCGATAGTGGTGGtggaaggggagagacagagctgAAGAGGGAAGGGAGGCTAAGGAGGGAAGAGAAAGGAGGTTGAGTCACAGTCTAGAGACAATGCCTCCCAGGTCCTTCCAACCTTGACCCTCCTCATTCACGTAACCACATCTGTTACCCATGATAAACCCCGCCTCCCCCATCCATTCTGGCTAAAAGTGTATACATGGACTTTTATTTGAGGTTAAATATTGTACCATCCCATGTCTCCTCTCACAGGCGAATGACCTTAACTGACAGCTCATCTAGTTAGTGGCGTGTAAATATTTGGGAAGTGGGAAGGGAATGTGTAATTAGAGAAACCCCACCACCTAGTGGGGAGGTTGGGTCCTGAATGTGCTGATGGGCATTGGTGTAGACCTCATTTGAAACCATTTTTGTTAGCTTATAAACATGATTTAGGTCGCAGTCTGAGGCGATATTTGTCATTACATTTTCAGGTTaccatatgtgtgtgtttatacttgTACAGAGCAGTATGTACTGCGTTGCTTGTTATTTTTATATAACACAAAAACAGAATAGGACCACGTTTATAAAAAACTGGTATTATCCGGAAGTATCTGAAACACCCAAAGTCTTTCTTATAATGCCCTTGGACTAGTCTGATTAAATGCCATGTGacgagcacacgcacacacactgtggcAAAATATGTGTGTTAAAATGTGAATTAAAACACAGAATAAAGAACCGAGAGGCCACAGTCCTTTCTTGGCTACAAGACCACACAACAGCCCTTAGACTAGTCATCCACTACATCCTACTGTGGAGAGCTGTAATCTGGGTCAAGGACACTCCCTTACACATTAACAACACGAATAAGTCACTTGGTTTACGGACAATTGATTTGAAACCCATCGAGAGATTGAGTGACACCTCTGCATGACCAAAATTCTGAAGCCATTAAAAGGACAGTTGAAACGGGCCACGAGAGACACACAGACTTCAGACGAGAATGGTAACAATGTGGCCGGATGTCTGAATGCCTGTGTCCTCAGCCTGATAGTGTACGGCTTTAAGGGGAGACAGATACAACTTTAAGGGGATGAGGTTTGTCCATGTGACCTAATATTGACAGGGGGTTCGAGTATCGCTCAACACCCTAATTCGCCTGTACACCATGGCACTTCAtgtagatctgaaaggattggatGGGTATAAGCAATATGGTGAATATACTAACAAGCCCACCAGAGGGCAAAGTGAAGATATTACCCATTTCTATATTGCTAACAAAAGAACTGTTCAAATCCAAACCTCTCAGATATAATAGAAATGCCACCGCCACACAGATGCACAAAAATGCACCAGAATTTAGCAGCAAAACATGTCCTAAGGGTTGGGATTGGGCACAGGCAGGAGTCCTTTTTCTCAGACCCTCTCGTCAGAATCTCTTCACTGAGAACACCAGGCCATGTCTGTTGAGGCGGTCAATGAGAGTTGTCCTGGCAAATGCAGCTCCTGGACTGTACACTCC
>TU795927
tgcgTCTTTATTAAATCAATaacttattttttacattgtttccTCACTGAtttgtgacatgtattaatgccaaaataacatgcaaaacaggccccacctgccctgaatgatgggtcaccactgagagagagaggacagagagagacagcaagaggatgaaagaaagaaatagaaAGAGATAGCGGGGAGGAGAGATAAGGTAAACAGAAAgtcagaggagaaagaaaggaagaacaGAAAAGacaagagagaaagggagcgagagataGTTAAATAGAGAGTGAATGCAGGGCTGGGAGCACCCGATAGGTGTTTTGCTCAGCAGCCCACTCTAAACATCATGCCTAACTGGTAGGGTGGAGGCTGTTTGCTGGACTGAGGAAGGGATCAGTCAGAAGAggggaggataagagaggagatggagagtgggagagagcaaAGGAGAAGTGAAGAGGAGACAAGACAGCAGGAGAGGATTGAGTAGAAAGGTGATTGAAGAGGGGATGAAGAgatgaggggaaaggagagggagacggaAGAGGGGATGAAGAgatgaggggaaaggagagggagagagcatgaatAACATCACACCCACGATGGCTGGATgtggggtagggagaggagagcagggaagaGGGATGGGGCTCCTGTAGCCTATGTGCATAGGGAAACAGACCACTGCATCCTCCTGTcttgctctccttctccctttccctgTTCGTTTCCTCAGCAACACGTATAGCTATGCTATGCACCCTGTACTTAACCACGCTACTTAACAATTACTCTCCCACAGTTTTATGATTGAACAAACCTGTCTATTTCCCTCTGTATCACTACAGTAGAACGAGaacactgctctctctgtctctctctctgtaatgctCTGCTAACAGAGTTGTTGCGATAGTGGTGGtggaaggggagagacagagctgAAGAGGGAAGGGAGGCTAAGGAGGGAAGAGAAAGGAGGTTGAGTCACAGTCTAGAGACAATGCCTCCCAGGTCCTTCCAACCTTGACCCTCCTCATTCACGTAACCACATCTGTTACCCATGATAAACCCCGCCTCCCCCATCCATTCTGGCTAAAAGTGTATACATGGACTTTTATTTGAGGTTAAATATTGTACCATCCCATGTCTCCTCTCACAGGCGAATGACCTTAACTGACAGCTCATCTAGTTAGTGGCGTGTAAATATTTGGGAAGTGGGAAGGGAATGTGTAATTAGAGAAACCCCACCACCTAGTGGGGAGGTTGGGTCCTGAATGTGCTGATGGGCATTGGTGTAGACCTCATTTGAAACCATTTTTGTTAGCTTATAAACATGATTTAGGTCGCAGTCTGAGGCGATATTTGTCATTACATTTTCAGGTTaccatatgtgtgtgtttatacttgTACAGAGCAGTATGTACTGCGTTGCTTGTTATTTTTATATAACACAAAAACAGAATAGGACCACGTTTATAAAAAACTGGTATTATCCGGAAGTATCTGAAACACCCAAAGTCTTTCTTATAATGCCCTTGGACTAGTCTGATTAAATGCCATGTGacgagcacacgcacacacactgtggcAAAATATGTGTGTTAAAATGTGAATTAAAACACAGAATAAAGAACCGAGAGGCCACAGTCCTTTCTTGGCTACAAGACCACACAACAGCCCTTAGACTAGTCATCCACTACATCCTACTGTGGAGAGCTGTAATCTGGGTCAAGGACACTCCCTTACACATTAACAACACGAATAAGTCACTTGGTTTACGGACAATTGATTTGAAACCCATCGAGAGATTGAGTGACACCTCTGCATGACCAAAATTCTGAAGCCATTAAAAGGACAGTTGAAACGGGCCACGAGAGACACACAGACTTCAGACGAGAATGGTAACAATGTGGCCGGATGTCTGAATGCCTGTGTCCTCAGCCTGATAGTGTACGGCTTTAAGGGGAGACAGATACAACTTTAAGGGGATGAGGTTTGTCCATGTGACCTAATATTGACATCCAGTATTTCCTCTAACATTTGACCACAGCAGTCATCGCGTTAAGCAATAGATACACAGAGCTGGTGGGACTAGGGCTAGGGGGTGATAGGGGGTTCGAGTATCGCTCAACACCCTAATTCGCCTGTACACCATGGCACTTCAtgtagatctgaaaggattggatGGGTATAAGCAATATGGTGAATATACTAACAAGCCCACCAGAGGGCAAAGTGAAGATATTACCCATTTCTATATTGCTAACAAAAGAACTGTTCAAATCCAAACCTCTCAGATATAATAGAAATGCACCAGAATTTAGCAGCAAAACATGTCCTAAGGGTTGGGATTGGGCACAGGCAGGAGTCCTTTTTCTCAGACCCTCTCGTCAGAATCTCTTCACTGAGAACACCAGGCCATGTCTGTTGAGGCGGTCAATGAGAGTTGTCCTGGCAAATGCAGCTCCTGGACTGTACACTCC

Function

NR:

description
saccharopine dehydrogenase-like oxidoreductase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU795925 False 2420 lncRNA 0.45 2 33952673 33955182
TU795927 True 2483 lncRNA 0.45 2 33952673 33955182

Neighbor

gene id symbol gene type direction distance location
LOC110529836 LOC106571586 coding downstream 111071 33831672 ~ 33841602 (-)
cdc42bpab LOC106571585 coding downstream 130435 33719374 ~ 33822238 (-)
LOC110529832 fbxo16 coding downstream 263621 33685369 ~ 33689052 (-)
LOC110529828 LOC106571602 coding downstream 403365 33484801 ~ 33549308 (-)
LOC110529827 LOC106606921 coding downstream 494201 33454287 ~ 33458472 (-)
LOC110529840 LOC106571603 coding upstream 20306 33975488 ~ 34009377 (-)
ankef1a LOC106571587 coding upstream 61828 34017010 ~ 34029131 (-)
LOC110529846 LOC106571592 coding upstream 181376 34136558 ~ 34157637 (-)
LOC110529843 LOC105030678 coding upstream 300333 34255515 ~ 34257262 (-)
LOC110529848 LOC106571583 coding upstream 589974 34545156 ~ 34550128 (-)
G699469 NA non-coding downstream 6795 33944883 ~ 33945878 (-)
G699457 NA non-coding downstream 64884 33887513 ~ 33887789 (-)
G699456 NA non-coding downstream 65740 33883703 ~ 33886933 (-)
G699451 NA non-coding downstream 80556 33871902 ~ 33872117 (-)
G699450 NA non-coding downstream 80814 33871655 ~ 33871859 (-)
G699476 NA non-coding upstream 395 33955577 ~ 33955914 (-)
G699479 NA non-coding upstream 3389 33958571 ~ 33958856 (-)
G699480 NA non-coding upstream 3831 33959013 ~ 33959233 (-)
G699486 NA non-coding upstream 11953 33967135 ~ 33967427 (-)
G699487 NA non-coding upstream 13481 33968663 ~ 33969244 (-)
G699468 NA other downstream 317 33943022 ~ 33952356 (-)
G698356 NA other downstream 962612 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 1453263 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 1735124 32214451 ~ 32217572 (-)
LOC110529793 LOC106571728 other downstream 2272938 31657632 ~ 31703525 (-)
G701454 NA other upstream 1627816 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 1686173 35633473 ~ 35705333 (-)
G701618 LOC106571560 other upstream 1945441 35900623 ~ 35918175 (-)
LOC110529880 LOC106571768 other upstream 3399914 37355096 ~ 37361922 (-)

Expression

G699474 Expression in all Baseline Samples

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G699474 Expression in each Bioproject

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G699474 Expression in each Sample
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Co-expression Network