Gene
RNA
| Item | Value |
|---|---|
| gene id | G699583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 34110854 ~ 34111080 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sphingosine-1-phosphate lyase 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU796045 | True | 227 | lncRNA | 0.56 | 1 | 34110854 | 34111080 |
34,108,400
34,108,800
34,109,200
34,109,600
34,110,000
34,110,400
34,110,800
34,111,200
34,111,600
34,112,000
34,112,400
34,112,800
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529838 | LOC106571596 | coding | upstream | 155659 | 33936526 ~ 33955195 (+) |
| LOC118965511 | LOC106571597 | coding | upstream | 181403 | 33920251 ~ 33930473 (+) |
| LOC118965510 | LOC106571597 | coding | upstream | 191901 | 33909753 ~ 33941058 (+) |
| LOC110529839 | LOC106571597 | coding | upstream | 202399 | 33889753 ~ 33908455 (+) |
| LOC110529837 | LOC106571584 | coding | upstream | 223870 | 33850636 ~ 33886984 (+) |
| LOC110529845 | LOC106571588 | coding | downstream | 47888 | 34158968 ~ 34166714 (+) |
| LOC110529844 | hs90a | coding | downstream | 55990 | 34167070 ~ 34177609 (+) |
| LOC110529847 | LOC106571593 | coding | downstream | 67217 | 34178297 ~ 34218679 (+) |
| LOC110529842 | LOC106571600 | coding | downstream | 263656 | 34374736 ~ 34387036 (+) |
| LOC110529849 | NA | coding | downstream | 442712 | 34553792 ~ 34557596 (+) |
| G699560 | NA | non-coding | upstream | 7134 | 34096044 ~ 34103720 (+) |
| G699541 | NA | non-coding | upstream | 75122 | 34035520 ~ 34035732 (+) |
| G699525 | NA | non-coding | upstream | 84244 | 34026380 ~ 34026610 (+) |
| G699521 | NA | non-coding | upstream | 87776 | 34022692 ~ 34023078 (+) |
| G699519 | NA | non-coding | upstream | 89345 | 34021248 ~ 34021509 (+) |
| G699589 | NA | non-coding | downstream | 6628 | 34117708 ~ 34118411 (+) |
| G699594 | NA | non-coding | downstream | 8473 | 34119553 ~ 34119791 (+) |
| G699638 | NA | non-coding | downstream | 73844 | 34184924 ~ 34185138 (+) |
| G699643 | NA | non-coding | downstream | 113363 | 34224443 ~ 34224648 (+) |
| G694036 | NA | other | upstream | 4318107 | 29790997 ~ 29792747 (+) |
| cdca4 | LOC106571684 | other | upstream | 5172581 | 28930668 ~ 28939888 (+) |
| G693207 | NA | other | upstream | 5405102 | 28704850 ~ 28705752 (+) |
| btbd7 | btbd7 | other | upstream | 5552481 | 28495104 ~ 28605625 (+) |
| G692424 | NA | other | upstream | 6040626 | 28069900 ~ 28070228 (+) |
| G699605 | NA | other | downstream | 16513 | 34127593 ~ 34128301 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 1343768 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 1502084 | 35613164 ~ 35614666 (+) |
| G700864 | NA | other | downstream | 1792969 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 2589358 | 36700438 ~ 36700739 (+) |
