G699727


Basic Information

Item Value
gene id G699727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 34370909 ~ 34371137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU796207
CATAAGAACTCCATTGAAGAAGCCAAGAGGTTGAACGCTCGCCAGACTAGGTGGGCTCTGTTTTTTAACAGGTTTGATTTCCACTAGCCTATCGCCCAGGATCCAAGACTCAGAAGGCAGACGCCCTGTCCCGCCAACATGATGTCTCTAACGAAGAGAGAAACCCAGAGCCCATCATCCCCAGCTCACGCATTGTGGCCCCTGTGATATGTAGTATTGAGATCACGAT

Function

NR:

description
calcium-dependent secretion activator 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU796207 True 229 lncRNA 0.50 1 34370909 34371137

Neighbor

gene id symbol gene type direction distance location
LOC110529847 LOC106571593 coding upstream 152230 34178297 ~ 34218679 (+)
LOC110529844 hs90a coding upstream 193300 34167070 ~ 34177609 (+)
LOC110529845 LOC106571588 coding upstream 204195 34158968 ~ 34166714 (+)
LOC110529838 LOC106571596 coding upstream 415714 33936526 ~ 33955195 (+)
LOC118965511 LOC106571597 coding upstream 441458 33920251 ~ 33930473 (+)
LOC110529842 LOC106571600 coding downstream 3599 34374736 ~ 34387036 (+)
LOC110529849 NA coding downstream 182655 34553792 ~ 34557596 (+)
LOC110529233 LOC106571582 coding downstream 428178 34799315 ~ 35163860 (+)
LOC100653435 fkbp3 coding downstream 923890 35295027 ~ 35318460 (+)
LOC110529852 arf6 coding downstream 965842 35336979 ~ 35340123 (+)
G699675 NA non-coding upstream 98125 34272375 ~ 34272784 (+)
G699664 NA non-coding upstream 109700 34259872 ~ 34261209 (+)
G699662 NA non-coding upstream 113655 34255945 ~ 34257254 (+)
G699660 NA non-coding upstream 116810 34253732 ~ 34254099 (+)
G699656 NA non-coding upstream 122002 34248642 ~ 34248907 (+)
G699724 NA non-coding downstream 21247 34392384 ~ 34392992 (+)
G699725 NA non-coding downstream 21944 34393081 ~ 34393898 (+)
G699878 NA non-coding downstream 27528 34398665 ~ 34399818 (+)
G699895 NA non-coding downstream 136048 34507185 ~ 34508791 (+)
G699890 NA non-coding downstream 146139 34517276 ~ 34525403 (+)
G699605 NA other upstream 242608 34127593 ~ 34128301 (+)
G694036 NA other upstream 4578162 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 5432636 28930668 ~ 28939888 (+)
G693207 NA other upstream 5665157 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 5812536 28495104 ~ 28605625 (+)
LOC110529856 LOC106571576 other downstream 1083711 35454437 ~ 35462086 (+)
G700685 NA other downstream 1242027 35613164 ~ 35614666 (+)
G700864 NA other downstream 1532912 35904049 ~ 35904698 (+)
G702415 NA other downstream 2329301 36700438 ~ 36700739 (+)
G702687 NA other downstream 2687208 37058345 ~ 37059223 (+)

Expression


Co-expression Network