Gene
RNA
| Item | Value |
|---|---|
| gene id | G699890 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 34517276 ~ 34525403 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU796405 | False | 403 | lncRNA | 0.39 | 3 | 34517276 | 34521367 |
| TU796407 | False | 754 | lncRNA | 0.37 | 3 | 34517276 | 34525403 |
| TU796402 | True | 537 | lncRNA | 0.39 | 2 | 34517758 | 34519525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529842 | LOC106571600 | coding | upstream | 130240 | 34374736 ~ 34387036 (+) |
| LOC110529847 | LOC106571593 | coding | upstream | 298597 | 34178297 ~ 34218679 (+) |
| LOC110529844 | hs90a | coding | upstream | 339667 | 34167070 ~ 34177609 (+) |
| LOC110529845 | LOC106571588 | coding | upstream | 350562 | 34158968 ~ 34166714 (+) |
| LOC110529838 | LOC106571596 | coding | upstream | 562081 | 33936526 ~ 33955195 (+) |
| LOC110529849 | NA | coding | downstream | 28389 | 34553792 ~ 34557596 (+) |
| LOC110529233 | LOC106571582 | coding | downstream | 273912 | 34799315 ~ 35163860 (+) |
| LOC100653435 | fkbp3 | coding | downstream | 769624 | 35295027 ~ 35318460 (+) |
| LOC110529852 | arf6 | coding | downstream | 811576 | 35336979 ~ 35340123 (+) |
| LOC110529853 | LOC106571579 | coding | downstream | 843299 | 35368702 ~ 35385937 (+) |
| G699895 | NA | non-coding | upstream | 8485 | 34507185 ~ 34508791 (+) |
| G699878 | NA | non-coding | upstream | 117458 | 34398665 ~ 34399818 (+) |
| G699725 | NA | non-coding | upstream | 123378 | 34393081 ~ 34393898 (+) |
| G699724 | NA | non-coding | upstream | 124284 | 34392384 ~ 34392992 (+) |
| G699727 | NA | non-coding | upstream | 146139 | 34370909 ~ 34371137 (+) |
| G699894 | NA | non-coding | downstream | 188 | 34525591 ~ 34527195 (+) |
| G699960 | NA | non-coding | downstream | 86471 | 34611874 ~ 34612206 (+) |
| G700036 | LOC107756720 | non-coding | downstream | 112571 | 34637974 ~ 34638200 (+) |
| G700040 | NA | non-coding | downstream | 119000 | 34644403 ~ 34644615 (+) |
| G699605 | NA | other | upstream | 388975 | 34127593 ~ 34128301 (+) |
| G694036 | NA | other | upstream | 4724529 | 29790997 ~ 29792747 (+) |
| cdca4 | LOC106571684 | other | upstream | 5579003 | 28930668 ~ 28939888 (+) |
| G693207 | NA | other | upstream | 5811524 | 28704850 ~ 28705752 (+) |
| btbd7 | btbd7 | other | upstream | 5958903 | 28495104 ~ 28605625 (+) |
| LOC110529856 | LOC106571576 | other | downstream | 929445 | 35454437 ~ 35462086 (+) |
| G700685 | NA | other | downstream | 1087761 | 35613164 ~ 35614666 (+) |
| G700864 | NA | other | downstream | 1378646 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 2175035 | 36700438 ~ 36700739 (+) |
| G702687 | NA | other | downstream | 2532942 | 37058345 ~ 37059223 (+) |
