G699894


Basic Information

Item Value
gene id G699894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 34525591 ~ 34527195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU796414
taaatgaaaagattaggtctcaatgttttgccaaggctgcactgcagcatctactcacaggtattatcccactactggacagcacgggggatttgacctgcttcgtttccgacctgggccggttcacccctccttagacaacctggtggtcccgggctcccccaggaacaccatatcgataccgaacttagcgtggacacccgttcgacatagagtgctgcagcccagagctcctcagctcacttgatccaccaacctcagcctcccagtgacttggattacaggcacatgccaccgcacccggcgagatattcagctgcaggtaaaggtgatagaggtaggagtctgtgacgtaattacgaaggacggttgtgggctaaaggcc

Function

NR:

description
PREDICTED: sphingosine-1-phosphate lyase 1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU796414 True 385 lncRNA 0.54 2 34525591 34527195

Neighbor

gene id symbol gene type direction distance location
LOC110529842 LOC106571600 coding upstream 138555 34374736 ~ 34387036 (+)
LOC110529847 LOC106571593 coding upstream 306912 34178297 ~ 34218679 (+)
LOC110529844 hs90a coding upstream 347982 34167070 ~ 34177609 (+)
LOC110529845 LOC106571588 coding upstream 358877 34158968 ~ 34166714 (+)
LOC110529838 LOC106571596 coding upstream 570396 33936526 ~ 33955195 (+)
LOC110529849 NA coding downstream 26597 34553792 ~ 34557596 (+)
LOC110529233 LOC106571582 coding downstream 272120 34799315 ~ 35163860 (+)
LOC100653435 fkbp3 coding downstream 767832 35295027 ~ 35318460 (+)
LOC110529852 arf6 coding downstream 809784 35336979 ~ 35340123 (+)
LOC110529853 LOC106571579 coding downstream 841507 35368702 ~ 35385937 (+)
G699890 NA non-coding upstream 188 34517276 ~ 34525403 (+)
G699895 NA non-coding upstream 16800 34507185 ~ 34508791 (+)
G699878 NA non-coding upstream 125773 34398665 ~ 34399818 (+)
G699725 NA non-coding upstream 131693 34393081 ~ 34393898 (+)
G699724 NA non-coding upstream 132599 34392384 ~ 34392992 (+)
G699960 NA non-coding downstream 84679 34611874 ~ 34612206 (+)
G700036 LOC107756720 non-coding downstream 110779 34637974 ~ 34638200 (+)
G700040 NA non-coding downstream 117208 34644403 ~ 34644615 (+)
G700054 NA non-coding downstream 125122 34652317 ~ 34652533 (+)
G699605 NA other upstream 397290 34127593 ~ 34128301 (+)
G694036 NA other upstream 4732844 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 5587318 28930668 ~ 28939888 (+)
G693207 NA other upstream 5819839 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 5967218 28495104 ~ 28605625 (+)
LOC110529856 LOC106571576 other downstream 927653 35454437 ~ 35462086 (+)
G700685 NA other downstream 1085969 35613164 ~ 35614666 (+)
G700864 NA other downstream 1376854 35904049 ~ 35904698 (+)
G702415 NA other downstream 2173243 36700438 ~ 36700739 (+)
G702687 NA other downstream 2531150 37058345 ~ 37059223 (+)

Expression


Co-expression Network