G700040


Basic Information

Item Value
gene id G700040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 34644403 ~ 34644615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU796578
ATCatacagtcatccggaacaactGATGCTTTCATGCATGTCTCAGTATTGCTTGTCTTGAAGCAAGAATAGAAGTGATGTAGCTCGTCTGGttggctcatgtcactgggcagctggcAGCTGTGCTTCCGTTTGTAGTCtgcaatagtttgcaagccctgccacataagacgatcgtcggagccggtgtagtatgattcagtcTTAGCCCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU796578 True 213 lncRNA 0.48 1 34644403 34644615

Neighbor

gene id symbol gene type direction distance location
LOC110529849 NA coding upstream 88334 34553792 ~ 34557596 (+)
LOC110529842 LOC106571600 coding upstream 257367 34374736 ~ 34387036 (+)
LOC110529847 LOC106571593 coding upstream 425724 34178297 ~ 34218679 (+)
LOC110529844 hs90a coding upstream 466794 34167070 ~ 34177609 (+)
LOC110529845 LOC106571588 coding upstream 477689 34158968 ~ 34166714 (+)
LOC110529233 LOC106571582 coding downstream 154700 34799315 ~ 35163860 (+)
LOC100653435 fkbp3 coding downstream 650412 35295027 ~ 35318460 (+)
LOC110529852 arf6 coding downstream 692364 35336979 ~ 35340123 (+)
LOC110529853 LOC106571579 coding downstream 724087 35368702 ~ 35385937 (+)
LOC110529856 LOC106571576 coding downstream 809822 35454437 ~ 35462086 (+)
G700036 LOC107756720 non-coding upstream 6203 34637974 ~ 34638200 (+)
G699960 NA non-coding upstream 32197 34611874 ~ 34612206 (+)
G699894 NA non-coding upstream 117208 34525591 ~ 34527195 (+)
G699890 NA non-coding upstream 119000 34517276 ~ 34525403 (+)
G700054 NA non-coding downstream 7702 34652317 ~ 34652533 (+)
G700072 NA non-coding downstream 21806 34666421 ~ 34666849 (+)
G700129 NA non-coding downstream 63151 34707766 ~ 34708037 (+)
G700134 NA non-coding downstream 66722 34711337 ~ 34789047 (+)
G700421 NA non-coding downstream 456329 35100944 ~ 35101608 (+)
G699605 NA other upstream 516102 34127593 ~ 34128301 (+)
G694036 NA other upstream 4851656 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 5706130 28930668 ~ 28939888 (+)
G693207 NA other upstream 5938651 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 6086030 28495104 ~ 28605625 (+)
G700685 NA other downstream 968549 35613164 ~ 35614666 (+)
G700864 NA other downstream 1259434 35904049 ~ 35904698 (+)
G702415 NA other downstream 2055823 36700438 ~ 36700739 (+)
G702687 NA other downstream 2413730 37058345 ~ 37059223 (+)

Expression


Co-expression Network