G700471


Basic Information

Item Value
gene id G700471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 35189474 ~ 35189879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU797018
GCCTGTCTAGCCTGCCAGAAGTTTGAGAGGGTGAAGACTGTGGCGCCGGAGTTGAAGCCCATTTTTTGTTTCACCATGTTACATGATTGGGGTGGACCTCATTTGACCCTTCACGAAATCCAGGAATGGCAACAGCTGGTGTCTGATGGCAGTAAAGGAAGAGAATGTGCTTAACTTAAATTCCATTCTGTAATCCATTAAAAAGGGTGCTTAGAACCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU797018 True 221 lncRNA 0.45 2 35189474 35189879

Neighbor

gene id symbol gene type direction distance location
LOC110529233 LOC106571582 coding upstream 25614 34799315 ~ 35163860 (+)
LOC110529849 NA coding upstream 633405 34553792 ~ 34557596 (+)
LOC110529842 LOC106571600 coding upstream 802438 34374736 ~ 34387036 (+)
LOC110529847 LOC106571593 coding upstream 970795 34178297 ~ 34218679 (+)
LOC110529844 hs90a coding upstream 1011865 34167070 ~ 34177609 (+)
LOC100653435 fkbp3 coding downstream 105148 35295027 ~ 35318460 (+)
LOC110529852 arf6 coding downstream 147100 35336979 ~ 35340123 (+)
LOC110529853 LOC106571579 coding downstream 178823 35368702 ~ 35385937 (+)
LOC110529856 LOC106571576 coding downstream 264558 35454437 ~ 35462086 (+)
LOC110529857 LOC106571574 coding downstream 284613 35474492 ~ 35484606 (+)
G700469 NA non-coding upstream 1244 35188023 ~ 35188230 (+)
G700457 NA non-coding upstream 19686 35169566 ~ 35169788 (+)
G700428 NA non-coding upstream 70706 35111398 ~ 35118768 (+)
G700421 NA non-coding upstream 87866 35100944 ~ 35101608 (+)
G700134 NA non-coding upstream 400427 34711337 ~ 34789047 (+)
G700492 NA non-coding downstream 34379 35224258 ~ 35303314 (+)
G700559 prpf39 non-coding downstream 117055 35306934 ~ 35312941 (+)
G700609 NA non-coding downstream 241025 35430904 ~ 35431123 (+)
G700617 NA non-coding downstream 261539 35451418 ~ 35451621 (+)
G700651 NA non-coding downstream 363243 35553122 ~ 35608232 (+)
G699605 NA other upstream 1061173 34127593 ~ 34128301 (+)
G694036 NA other upstream 5396727 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 6251201 28930668 ~ 28939888 (+)
G693207 NA other upstream 6483722 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 6631101 28495104 ~ 28605625 (+)
G700685 NA other downstream 423285 35613164 ~ 35614666 (+)
G700864 NA other downstream 714170 35904049 ~ 35904698 (+)
G702415 NA other downstream 1510559 36700438 ~ 36700739 (+)
G702687 NA other downstream 1868466 37058345 ~ 37059223 (+)

Expression


Co-expression Network