G701362


Basic Information

Item Value
gene id G701362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 35458052 ~ 35502645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU798004
ttagcctttatttaaaaaaaaaaaaaacatcccttAGCACATCTTACAGATCAGAGGGGGCCAGGGCTGGTCACCCCAAAACAACAAATGTTGCCCCCCTTTAGCTGGTCCTGCAGGGGCACAGTGTGTGGGGGTGCCTAGAATATATGCCCACTGAGCTAAGGTCAGTTTGCATCCCCCGTCCCTAATGGTGAAGGTTAGGATTTGGaaagggtaagctgatcctagatagGTGTGCCTAAAGGGAAATTCTAGCAAAAGGAGCAGCTCAACTCCAGTCCTACGTGGCCTATCTTATCAACAGGCCAGTTGCTGCGGATAAAAACAGAGTGGAACATCCAATAAACAAAAAAAACTTGACAACTCTCATCCaatgagatgggagaggagtgggtggGCTCTGGGATGAAGGGTAGCTTGGCAACCGGTGGGACGCTGGTCCTCCAGGACCAGTTAAGGGGCCTTTGTGAAATCAACTTGATTTCTCTGGAGTGAAAACCATTTATTGATTTCATATAAAGCCATAAGGGATGGGAAGTTATCAGCTAATCTGGAAGCGGCTGTTTCTTCTTTAGACCACTCCTTTGTAGAAACAGACCAGAGCATTAGATGTACATTAAATAGATATACGAAGGACTATAGAAATGACCAATGACAGACTGCTGAGGAAGCCCTTCAACTGGAGTTCATTCAATGAGGTGCAACATTCAGAACATTGCAGCTAGAAATGTAGTGAATAGAGCTGACACAATTCCCAATTCTACAAGACCGAGAATCAGATTGGTTCTAGACAAAACATTTATATATGAGCTTTCTGTAAAAAAGGGCACCCTCCTGAACAGACCTCTGGTGTTGATGGTCAAAGTGGAGCGGTCTGGTCTATCATGGAATACTAGAATGCTCACGGTTCCTACTGGCACTGCCAGGGGTTAACAATGTTAAAAAAGTAGGGGGTAAATAAAAGACCCGTTCCATGAGAATGAGGAGCGAGGGTCGGACCAAATTAAAAAGACCCATTTCATTTgaaaataggacaggagagagcCTCACACCTCTAGAATAAAACAGGATCAGAGTGATGTCAGAAAGAGTCCAGATTCTACACAGGGAGCCAAATGGAAGTCTTCCCAGTGAATGGAACAGAGTGCCATGGGAACAGTTCGAAACAGTTTCGCTCGGGAACGGTTAACCTGGCTCCCCATCTGTGCTTCTGGATCTCTAATAACGTCATCGCTGTTCAATATACACCGCTGGATCGGTCAAAATAAATGAGCAGAGAAAAAGAAACAGAAAACCCGGTCAATCAATCCCTCAAAAAACACAATTCACAAAAAGTTGCTCTCAAATGTCAAATCAATAGAGAACCAACACTCGTATATAAATCTGCAAtggaaaaaaaaataataataatctgatcCGTATTTTGTAACACACACAAGCTGATGTGTGGGTGGTTAGTCCGTCGGTTTACATCCGCTCCTACTTCCCATTCTGCAATCGTAGCCAGTTGAATAGCAGAACGGCCTATTTCGACAAAGACCTCAGGTAACAGTTCCTAACTGTTTGCATGTTTTTATACCAGATGTAAAATAGCAGATGCAAACACTGAGTAAACCTGGCCCAAAATGACTTGTGTATGTCAATGTATACCATAGAACACATCATGGGTAGATACTAGATAGCTGCTCCCTCTTGGCCTTTGTGACAGCAATCACAGCTCAGCGGTACAGAACAGTAGTGTCTCTGCTAGGACGTGATTCAGCTCTTCAGTTCTTACTGCTGCTCAGTACTATAGCTCCCGGGATCCATGTCTTcactatactgtagaggactTAAATGGGAATGGGCGAAGTGGGAGTCTGAACAGAACCGATTCCATACCACTCTGTCAAAACACGCGTacctctttcacacacacacatgctcactgCAGCAATAGCCAAACAAAGTGCATCTGACCTTTGTTCATTTACtctgggaagaaaaaaaacaatgtatatatatttatttttttcaattttttaaaGCAGCCACAAATGCATATTTTCTTCGCCATAATTAGAGTGGATAGAAAACACCTGGTGCGTTAGTCATTCCCAGGACAGTGGAGATCTAAAATGTTACTGGGGAGTGATCTGCATCAGAGTAGGGTCCCTGGGAAGTGCACACAAGGCTCGGACAAAAAGGGAAAGTGAGCGAGTGTAAGAGCGTATAGTAAGGAATCTAAACAAACTCAGAAAGCAAGTTGCTGATAGGAAAACTGATAACAATACTTCTGCCCTCTTTTACCAGAGGTGAACCAAAGATGAGCGTACTCAAAACACACAGCGAAGCCAACAGGGGTCCAGCATTTTTAATATTACTATTCCAGCCAGACActttgccatgctgaaacaggactCGAGTGCTCTGGATGGGGTTCATTCAGACAGACAACTGTGACGAAGATAAATTGAAAGACAGAGTGGTACTTGGGAACGAGAGTCTACAAATTAGGAGAAATCTGAATGAACAAACTGCAATAATGGAATAGTTTCCCCTCCCACACCTACAACGACGCCTTTCTCAATAACTATTTTGAATTAAAACCGAATTCTCTCCTTCTAAAGGTTATTCAGCAGTGTTCCAGTGGCTGGAAGTGCATTTGGTGAAAATTTGCTTTGATCTGCAAAAAGGCCCAATCTCAAAATAGCCCCTCCTCCACTAAGCACTTCACATATGTCTAAAATGATTGAATAGGAATGATTAAAATGGTTATAGCCCCaccttgccctctgataggcCAGGAGGAATTTGCACCATACTGCTTACACCAGTCCAGTCCTTTCAGATCTACACGTGCCTAGGAGTTAGGACTATGGTTCTGTTTGGAACTGGGCAACGCTCAGTGTTAATCAACACACACTCATCCCGCCACTTGTGTTAAAAATGAATGCATGCATATCTTTACAGGCTCCAGCTCTTTGTCTGGGGGTGAAAACTGAACAGCGAGCAAAGCAATCGGCGTGATCATCTCACACCGTAGGGGGCAACAAAAACACAGACGGGGGGAGAAACGCACACCAACACGCATAACTCAGGATTCCCATCAAGCACTACACAACTTCACAAACACTCACACCCAGTCACACCAACCACATCCCTTACACGTGCATCCAAGAAATAGCCTGAACACTCACTTTTCCAAATCCACTAggcaaaacaaacacacacactatagcttTTCCAACCCCCTGTTGACTCATGAGATTAAAAAAGAAACGCAAAAAAAACCTTGACAAATATTTCTTGAGTCTGCCCCCCCCCACTTCCTTATTTTCACCCTCCAtttattcttttttttctccacttctTCTTGCCTGCATTCTGGTGGATGACTCAACGTGATGAGTTGCCCTCCGGGGGTTTGTGGGTACTGACTTGACCTCATGCCTCACACACTGCTCcgttgggggggggtggggtcaaAGTTTAGAGGCTAAAGGTCACAAGACCACATTACacatcccctcccccctctcacaGGGTCATACAGCTAAGGCGGCAGGGGTCTCTTCATAAAAACATTTGGTGGGATTTCTGTCTGTCCTTTCAGTGCAGCCTTGACCAAAGAGCCATTATCCAAGATGTCGAGGATCAAAAAAGGAGGGGTGTATGTCTGATGGGGGTAGTGTGCGTGTGCCTATGTGTATGCATATGTATGTGAATATGCGTGCATGTGCATAAGGGTGCATGTGTGTGACTGAGACTGTGGAGTTGGTTCAGCAAGAGGGCAGCAcctgtcatcctcctctctctagcgGAGCCAGAGTTTGAGCCTCAGCGCGTCCACACCATTCAGATAATATCTGAAGAGCCTCTTGTCTCGGACAAAACCCAGGTTCTCATACAGCTTCAGAGCTGACTTGTTAGT

Function

NR:

description
hypothetical protein Z043_124289

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU798004 True 3913 lncRNA 0.44 2 35458052 35502645
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529854 LOC106571577 coding downstream 28915 35426316 ~ 35429137 (-)
LOC110529851 prpf39 coding downstream 136247 35306928 ~ 35321805 (-)
LOC110529850 fau coding downstream 153322 35302554 ~ 35304730 (-)
LOC118965512 NA coding downstream 658748 34797845 ~ 34799304 (-)
LOC110529848 LOC106571583 coding downstream 907924 34545156 ~ 34550128 (-)
LOC110529861 LOC106571572 coding upstream 35044 35537689 ~ 35546844 (-)
LOC110529862 LOC106571571 coding upstream 50763 35553221 ~ 35608497 (-)
LOC110529864 LOC106571569 coding upstream 125507 35628152 ~ 35632437 (-)
LOC110529865 LOC106571568 coding upstream 130828 35633473 ~ 35705333 (-)
LOC110529866 LOC106571566 coding upstream 205396 35708041 ~ 35798020 (-)
G701353 NA non-coding downstream 46894 35410941 ~ 35411158 (-)
G701291 NA non-coding downstream 162716 35289149 ~ 35295336 (-)
G701204 NA non-coding downstream 270049 35187594 ~ 35188003 (-)
G701190 NA non-coding downstream 284534 35173298 ~ 35173518 (-)
G701151 NA non-coding downstream 339288 35110954 ~ 35118764 (-)
G701395 NA non-coding upstream 157705 35660350 ~ 35679252 (-)
G701486 NA non-coding upstream 219428 35722073 ~ 35722772 (-)
G701522 NA non-coding upstream 229596 35732241 ~ 35732648 (-)
G701533 NA non-coding upstream 259063 35761708 ~ 35761938 (-)
ankef1a LOC106571587 other downstream 1434167 34017010 ~ 34029131 (-)
G699468 NA other downstream 1505696 33943022 ~ 33952356 (-)
G698356 NA other downstream 2467991 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 2958642 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 3240503 32214451 ~ 32217572 (-)
G701454 NA other upstream 80353 35582998 ~ 35589877 (-)
G701618 LOC106571560 other upstream 397978 35900623 ~ 35918175 (-)
LOC110529880 LOC106571768 other upstream 1852451 37355096 ~ 37361922 (-)
LOC110530908 otof other upstream 1986582 37474229 ~ 37626960 (-)

Expression

G701362 Expression in all Baseline Samples

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G701362 Expression in each Bioproject

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G701362 Expression in each Sample
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Co-expression Network