Gene
RNA
| Item | Value |
|---|---|
| gene id | G700707 |
| gene name | LOC107392296 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 35653038 ~ 35655716 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00048728 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU797292 | False | 1707 | lncRNA | 0.52 | 4 | 35653038 | 35655716 |
| TU797293 | False | 1747 | lncRNA | 0.52 | 3 | 35653038 | 35655716 |
| TU797295 | False | 1651 | lncRNA | 0.52 | 6 | 35653038 | 35655716 |
| TU797296 | False | 1459 | lncRNA | 0.51 | 7 | 35653038 | 35655716 |
| TU797299 | False | 1682 | lncRNA | 0.51 | 7 | 35653038 | 35655716 |
| TU797302 | False | 1427 | lncRNA | 0.52 | 9 | 35653038 | 35655716 |
| TU797304 | True | 1475 | lncRNA | 0.51 | 7 | 35653038 | 35655716 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529863 | LOC106571570 | coding | upstream | 56634 | 35574306 ~ 35596404 (+) |
| znf410 | zn410 | coding | upstream | 114701 | 35514934 ~ 35538337 (+) |
| cipcb | LOC106571573 | coding | upstream | 147207 | 35502866 ~ 35505831 (+) |
| LOC110529858 | LOC106571724 | coding | upstream | 150379 | 35489254 ~ 35502659 (+) |
| LOC110529857 | LOC106571574 | coding | upstream | 168432 | 35474492 ~ 35484606 (+) |
| LOC110529234 | LOC106571562 | coding | downstream | 199244 | 35854960 ~ 35901652 (+) |
| LOC110529869 | LOC106571559 | coding | downstream | 280691 | 35936407 ~ 36051280 (+) |
| LOC118965513 | NA | coding | downstream | 809240 | 36464956 ~ 36467606 (+) |
| fermt1 | LOC106571740 | coding | downstream | 932924 | 36588640 ~ 36604558 (+) |
| trmt6 | trmt6 | coding | downstream | 949852 | 36605568 ~ 36619010 (+) |
| G700667 | NA | non-coding | upstream | 13013 | 35589711 ~ 35640025 (+) |
| G700687 | NA | non-coding | upstream | 34764 | 35613444 ~ 35618274 (+) |
| G700651 | NA | non-coding | upstream | 44806 | 35553122 ~ 35608232 (+) |
| G700617 | NA | non-coding | upstream | 201417 | 35451418 ~ 35451621 (+) |
| G700609 | NA | non-coding | upstream | 221915 | 35430904 ~ 35431123 (+) |
| G700746 | NA | non-coding | downstream | 73454 | 35729170 ~ 35729421 (+) |
| G700749 | NA | non-coding | downstream | 80597 | 35736313 ~ 35736598 (+) |
| G700750 | NA | non-coding | downstream | 81126 | 35736842 ~ 35737268 (+) |
| G700761 | NA | non-coding | downstream | 92164 | 35747880 ~ 35748126 (+) |
| G700765 | NA | non-coding | downstream | 97121 | 35752837 ~ 35753082 (+) |
| G700685 | NA | other | upstream | 38372 | 35613164 ~ 35614666 (+) |
| LOC110529856 | LOC106571576 | other | upstream | 190998 | 35454437 ~ 35462086 (+) |
| G699605 | NA | other | upstream | 1524737 | 34127593 ~ 34128301 (+) |
| G694036 | NA | other | upstream | 5860291 | 29790997 ~ 29792747 (+) |
| cdca4 | LOC106571684 | other | upstream | 6714765 | 28930668 ~ 28939888 (+) |
| G700864 | NA | other | downstream | 248333 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 1044722 | 36700438 ~ 36700739 (+) |
| G702687 | NA | other | downstream | 1402629 | 37058345 ~ 37059223 (+) |
| G702817 | LOC106571770 | other | downstream | 1593021 | 37248737 ~ 37249809 (+) |
| G703835 | LOC106584613 | other | downstream | 2115148 | 37770864 ~ 37771635 (+) |
