Gene
RNA
| Item | Value |
|---|---|
| gene id | G700827 |
| gene name | LOC106571563 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 35845819 ~ 35846302 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: MAX associated protein-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU797437 | True | 249 | lncRNA | 0.54 | 2 | 35845819 | 35846302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529863 | LOC106571570 | coding | upstream | 249415 | 35574306 ~ 35596404 (+) |
| znf410 | zn410 | coding | upstream | 307482 | 35514934 ~ 35538337 (+) |
| cipcb | LOC106571573 | coding | upstream | 339988 | 35502866 ~ 35505831 (+) |
| LOC110529858 | LOC106571724 | coding | upstream | 343160 | 35489254 ~ 35502659 (+) |
| LOC110529857 | LOC106571574 | coding | upstream | 361213 | 35474492 ~ 35484606 (+) |
| LOC110529234 | LOC106571562 | coding | downstream | 8658 | 35854960 ~ 35901652 (+) |
| LOC110529869 | LOC106571559 | coding | downstream | 90105 | 35936407 ~ 36051280 (+) |
| LOC118965513 | NA | coding | downstream | 618654 | 36464956 ~ 36467606 (+) |
| fermt1 | LOC106571740 | coding | downstream | 742338 | 36588640 ~ 36604558 (+) |
| trmt6 | trmt6 | coding | downstream | 759266 | 36605568 ~ 36619010 (+) |
| G700778 | NA | non-coding | upstream | 77233 | 35768355 ~ 35768586 (+) |
| G700777 | NA | non-coding | upstream | 78743 | 35766756 ~ 35767076 (+) |
| G700767 | NA | non-coding | upstream | 91473 | 35754145 ~ 35754346 (+) |
| G700765 | NA | non-coding | upstream | 92737 | 35752837 ~ 35753082 (+) |
| G700761 | NA | non-coding | upstream | 97693 | 35747880 ~ 35748126 (+) |
| G700652 | NA | non-coding | downstream | 7248 | 35853550 ~ 35854673 (+) |
| G701706 | NA | non-coding | downstream | 164466 | 36010768 ~ 36010992 (+) |
| G701708 | NA | non-coding | downstream | 166214 | 36012516 ~ 36012817 (+) |
| G701713 | NA | non-coding | downstream | 176804 | 36023106 ~ 36023309 (+) |
| G701727 | NA | non-coding | downstream | 205452 | 36051754 ~ 36052020 (+) |
| G700685 | NA | other | upstream | 231153 | 35613164 ~ 35614666 (+) |
| LOC110529856 | LOC106571576 | other | upstream | 383779 | 35454437 ~ 35462086 (+) |
| G699605 | NA | other | upstream | 1717518 | 34127593 ~ 34128301 (+) |
| G694036 | NA | other | upstream | 6053072 | 29790997 ~ 29792747 (+) |
| cdca4 | LOC106571684 | other | upstream | 6907546 | 28930668 ~ 28939888 (+) |
| G700864 | NA | other | downstream | 57747 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 854136 | 36700438 ~ 36700739 (+) |
| G702687 | NA | other | downstream | 1212043 | 37058345 ~ 37059223 (+) |
| G702817 | LOC106571770 | other | downstream | 1402435 | 37248737 ~ 37249809 (+) |
| G703835 | LOC106584613 | other | downstream | 1924562 | 37770864 ~ 37771635 (+) |
