G701618 (LOC106571560)


Basic Information

Item Value
gene id G701618
gene name LOC106571560
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 35900623 ~ 35918175 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU798297
CCTCCCCAATTCCAGCCTCAGCCTACACCCCAGCATTTTCAACCTCAAGGCCCAGCTCTGATTCAAGCCCAGGCCCAGGGCCCCAGTCAGCCTAGTGTCCCAGGGTGGCCAGTCCCAGGCCTTAGCCCAAGCGTTAACCCAGGGTCTGGATGGCCATTAGGCCCTGTTCAGGACACAGATGGCTTCACACCTGCTCCACAGTGGAATCCGACACCAGCTGGATTGAGCGTGCCCTACAACCTGAACCTACAAAGAGGCATCTACGACAAGATGATGATCACCATCATGGGCCGGGTCAAACCAAATGCTAAGCAGTTCACAGTCAACTTCCTGCGAGGTAAAGACATCGCCTTCCACCTCAACTCTCGGTTCAGTGAGGGGGGCAAGCAGGCAGTGGTGAGGAACACCAAGGTGGGAGAGcgctgggggaaggaggagaggcacACACAAGGAAGTTTCCCCTTCATGGCAGGACAGTCCTTTGAGATGAAGATTCTGGTTACATCTGGGGAGTTCAAGGTGGCTGTGAACAGAGCACAGCTGTTTGAGTTTAAACACCGTGTCAGAGAACTCAGCCAGATCGATCGCGTCAACATCCTCTATGATGTCATCCTCACCTCCATCAACGTAGAAACAATGCCATgacacccacatacagtatataacaccCAGCAGAGGCTACATGCATAACATGGCATCAATCTGCATTTGTCTTTGCACCCGTTTTATGATGATAATGAGCTGTACACTTAAAACCACATTAATTCCCACTAACAAACACTCCATCTGCAAATGTGTGTAATGTTAAAAGGCCTAAGAATTCAACACTGCCATTTAATGGTAATTCTTATATTTCATAACTTTTTTCTGTTGAATgtctatataaatatacatacttTATGACTTTGAACTGACTAAAGATATCAGTAGTTACAGAACGTCTCTATATGAGAGGATTCAGCGTCCTTCAGGGGTCGTTTTTAGAATCTAACCAGCTGGGTTAATTTTTGCCACTGTCAATCAGTTGGTAGAgtatggcgcttgcaacgccagggttgtgggttcgatacCCATGGTAGAACAGTATggtaaaaaagtatgaaaatgtatgcacgcactactataagtcgctctggataagagcgcctgctaaatgactaaaatgtcaaatgtaaaattGTATGAAATAAAACCATTAAATTGAATGAAGTTATCTTTGAAATATTTTTATTGTATCAGACCTCTCATACAACTGCAATATCAAGACAGGTTTGACAGTCAACTCGATGCACACAAACAAATCACATTCACACAACACTCACAATAAAACCAGGGGAAATAGAGACATTAAGCATAGATTCAAAAACATGTGGAGTAAGACACATGATCATCATTGAGAAAAGTCAGTGGCATCGCACAGTTAGTGAATGTAAACATGTCTACCCTTGCCGTGCAAGCTAAAAATGTTTGAGAATTCACAGTTAAAAGGATAAAACCGGCATAAAGGATTTATGGCCACTCCATTTTCTTAGGGAAAACCCATGTCATTTTCTCCCCTCAATAGTGGACAGGACATATTTGCCCACAGTGCAGTCCCAGAATAAATTAATTTTTCCTTCCTTCATTCCTCCCTTCATTAATCTCTACAgccattcaaaatcaaatacaaatctaaTCAGTTTATTTGTTATGTGCAGGTGTAAGAAGTACAGTGAAACGATTGCTTACAAGTTCTTCCTCAACGTTGCAGTAGTACTGAGTcatataaaataaatacacacaagACATTTTTAACAACTCATTTATCCATCTTCACtctatttaatattttattaaacTTCTCTATGAGGAAGTGTCCGGTTCTCATTGTCCTTATGATTTGTTGATTACCGAGCgattcctgtctgtgtgtattttCATATGTGTAATACGCATTTAATTCATATGCATGTCTGCTTGAATGCATCTTCTGTGTATGTATCATTTTTAGATCTTGTTGTCCAGTCTCTTCTCCACTGACTTTAGTAAGAGCTCAGAATACTGCTGCAGGAGAGCCAATGTCCTGTCCCCCTCACCTTTGACCCCTACCTCCCCTCTCATTGCTACCTCCTCCCTGAGCCATTTACTTCTATGTACAAGGTGAGGTAGGGAGTCTAGTTCAGTCTTCACTGTTCCCAGGGCCTCAACCAGAACCGTCTCCATCTCCTGCTGCTCTGCATTGACCTCTAACCCACTGCTCA
>TU798300
GAGCGTGCCCTACAACCTGAACCTACAAAGAGGCATCTACGACAAGATGATGATCACCATCATGGGCCGGGTCAAACCAAATGCTAAGCAGTTCACAGTGAACTTTGTGCGTGGTAATGACATTGCCTTCCACCTCAACCCTCGGTTCAACGACGGGGGCAAGCAGGCAGTGGTGAGGAACACCATGGTGGGAGAGcgctgggggaaggaggagaggcacACACAGGGAGGCTTCCCCTTCATGGCTGGACAGTCCTTCGAGATGAAGATTCTGGTTACATCTGGGGAGTTCAAGGTGGCTGTGAACAGAGCACAGCTGTTTGAGTTTAAACACCGTGTCAGAGAACTCAGCCAGATCGATCGCGTCAACATCCTCTATGATGTCATCCTCACCTCCATCAACGTAGAAACAATGCCATgacacccacatacagtatataacaccCAGCAGAGGCTACATGCATAACATGGCATCAATCTGCATTTGTCTTTGCACCCGTTTTATGATGATAATGAGCTGTACACTTAAAACCACATTAATTCCCACTAACAAACACTCCATCTGCAAATGTGTGTAATGTTAAAAGGCCTAAGAATTCAACACTGCCATTTAATGGTAATTCTTATATTTCATAACTTTTTTCTGTTGAATgtctatataaatatacatacttTATGACTTTGAACTGACTAAAGATATCAGTAGTTACAGAACGTCTCTATATGAGAGGATTCAGCGTCCTTCAGGGGTCGTTTTTAGAATCTAACCAGCTGGGTTAATTTTTGCCACTGTCAATCAGTTGGTAGAgtatggcgcttgcaacgccagggttgtgggttcgatacCCATGGTAGAACAGTATggtaaaaaagtatgaaaatgtatgcacgcactactataagtcgctctggataagagcgcctgctaaatgactaaaatgtcaaatgtaaaattGTATGAAATAAAACCATTAAATTGAATGAAGTTATCTTTGAAATATTTTTATTGTATCAGACCTCTCATACAACTGCAATATCAAGACAGGTTTGACAGTCAACTCGATGCACACAAACAAATCACATTCACACAACACTCACAATAAAACCAGGGGAAATAGAGACATTAAGCATAGATTCAAAAACATGTGGAGTAAGACACATGATCATCATTGAGAAAAGTCAGTGGCATCGCACAGTTAGTGAATGTAAACATGTCTACCCTTGCCGTGCAAGCTAAAAATGTTTGAGAATTCACAGTTAAAAGGATAAAACCGGCATAAAGGATTTATGGCCACTCCATTTTCTTAGGGAAAACCCATGTCATTTTCTCCCCTCAATAGTGGACAGGACATATTTGCCCACAGTGCAGTCCCAGAATAAATTAATTTTTCCTTCCTTCATTCCTCCCTTCATTAATCTCTACAgccattcaaaatcaaatacaaatctaaTCAGTTTATTTGTTATGTGCAGGTGTAAGAAGTACAGTGAAACGATTGCTTACAAGTTCTTCCTCAACGTTGCAGTAGTACTGAGTcatataaaataaatacacacaagACATTTTTAACAACTCATTTATCCATCTTCACtctatttaatattttattaaacTTCTCTATGAGGAAGTGTCCGGTTCTCATTGTCCTTATGATTTGTTGATTACCGAGCgattcctgtctgtgtgtattttCATATGTGTAATACGCATTTAATTCATATGCATGTCTGCTTGAATGCATCTTCTGTGTATGTATCATTTTTAGATCTTGTTGTCCAGTCTCTTCTCCACTGACTTTAGTAAGAGCTCAGAATACTGCTGCAGGAGAGCCAATGTCCTGTCCCCCTCACCTTTGACCCCTACCTCCCCTCTCATTGCTACCTCCTCCCTGAGCCATTTACTTCTATGTACAAGGTGAGGTAGGGAGTCTAGTTCAGTCTTCACTGTTCCCAGGGCCTCAACCAGAACCGTCTCCATCTCCTGCTGCTCTGCATTGACCTCTAACCCACTGCTCA

Function

NR:

description
galectin-3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU798297 False 2240 TUCP 0.43 4 35900623 35904272
TU798300 True 2016 TUCP 0.41 3 35900623 35918175

Neighbor

gene id symbol gene type direction distance location
LOC110529866 LOC106571566 coding downstream 102603 35708041 ~ 35798020 (-)
LOC110529865 LOC106571568 coding downstream 195290 35633473 ~ 35705333 (-)
LOC110529864 LOC106571569 coding downstream 268186 35628152 ~ 35632437 (-)
LOC110529862 LOC106571571 coding downstream 330816 35553221 ~ 35608497 (-)
LOC110529861 LOC106571572 coding downstream 353779 35537689 ~ 35546844 (-)
LOC110529870 LOC106571558 coding upstream 134761 36052936 ~ 36059371 (-)
LOC110529235 plcb4 coding upstream 145362 36063537 ~ 36206480 (-)
LOC110529236 plcb1 coding upstream 298059 36216234 ~ 36490738 (-)
LOC110529872 LOC106571739 coding upstream 625640 36543815 ~ 36552132 (-)
LOC110529875 LOC106571742 coding upstream 700926 36619101 ~ 36626061 (-)
G701552 NA non-coding downstream 101044 35798798 ~ 35799579 (-)
G701538 NA non-coding downstream 131410 35768175 ~ 35769213 (-)
G701537 NA non-coding downstream 134185 35766223 ~ 35766438 (-)
G701536 NA non-coding downstream 134602 35765802 ~ 35766021 (-)
G701533 NA non-coding downstream 138685 35761708 ~ 35761938 (-)
G701966 NA non-coding upstream 14159 35932334 ~ 35956729 (-)
G702011 NA non-coding upstream 86068 36004243 ~ 36006929 (-)
G702014 NA non-coding upstream 91317 36009492 ~ 36009856 (-)
G702017 NA non-coding upstream 97700 36015875 ~ 36016190 (-)
G702020 NA non-coding upstream 101718 36019893 ~ 36020104 (-)
G701454 NA other downstream 310746 35582998 ~ 35589877 (-)
ankef1a LOC106571587 other downstream 1876738 34017010 ~ 34029131 (-)
G699468 NA other downstream 1948267 33943022 ~ 33952356 (-)
G698356 NA other downstream 2910562 32989245 ~ 32990061 (-)
LOC110529880 LOC106571768 other upstream 1436921 37355096 ~ 37361922 (-)
LOC110530908 otof other upstream 1571052 37474229 ~ 37626960 (-)
G704702 NA other upstream 2119550 38037725 ~ 38038346 (-)
G704874 NA other upstream 2395314 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 3301469 39219644 ~ 39226313 (-)

Expression


Co-expression Network