G703087


Basic Information

Item Value
gene id G703087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 36643320 ~ 36644736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU799877
CTGCGCTAGGATAGACAAGGGGGAGAAGCTTGCGTCCCGTGCTCAAATCCAAGCTCAGCTTATAGCCAGCTGGCAGAGCTCCAGGCATGGACACTCTCCTCTGAGCATTACGGAAAAACTGCACTGAAGTGAGCTAGAGGGGATCAACACAGATGTGGGGAAAGTGAGCTAAATAACCCACAAATGATCTTAAAAACGGCTGTAGCGTAGCTAACCTCATGCTTTCTAACGTTACTTGAATTTTAATGGGCCAAAACACAATCAAATAGGGCACTTCTTTAATATGTCCGATTACTTCACACGCTGACCGTACATAAAAAAGATGAGCTCACCTTTGACTCCAGGAAGTGGCCTTTGAAGTAACGATAGGTTGGCACAGCACCTCTGGGCACACTGACGGTCCTCTTCCACAATGCCATCGTGTTCAACCGGTTGTAGGGTCACAGCTCTTTGATGGCACCAGCCTCCTAAAGCTTCACAGCTACCAACCACAGCTATCACCTCACCTAGTCATACACCATATTATTACATTCAATTAAACAAGTCATAACTGTTTacattcaccacacacacactctctctctctctctcatcaggcTCTAATGATCAAGTGCTTTTCAGCTAAACTCTCATGGACAAACTACGTAAATCGAGAATCTGACCAAATTAATCAAGATTTTAGTTCCGGGTCAGGTAACTGAGATGAACTAAAAGCTGACATTCCTGACTGTCTGGTTCGTTGTCAATCTTTCTGTCTAAAGTTGTCTTGAATTGAATAGTCTTCTTGTTTCAGATGAGTCTGCTGCCCTGCAGTAGGGGTTGGTCTTACCTGGGGATGTGTCTCCCCTAACTGCCAAAGTCACTTGAGTTGTCTCCATAGTTGACACAGGCACAAACAAGGACAATTGCAGGCGCAATCAAGCTGGAAAACCAGGAACTTAATGGTAAAACAGGCATAAATTTAGTGGATTAACAAAGCTGTGCTGGGTAGTAGAACCTCTATGACTGGACCAGAATATGGCCTTGGATATTCAACATCTCCTGTAAAGCCAGATTCTGGTTCAAtctatgacaacaaaaaaaaaagtgcccACAACCACTCGGACTAGCTAGTTCGCTACTAAGATAACAGATCAAAAGCTAGTATTAGAGCAGCCAAGACTGATGTATCTATAGAACTCGACAGTTTGT

Function

NR:

description
glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799877 True 1191 lncRNA 0.44 2 36643320 36644736

Neighbor

gene id symbol gene type direction distance location
LOC110529875 LOC106571742 coding downstream 17259 36619101 ~ 36626061 (-)
LOC110529872 LOC106571739 coding downstream 91188 36543815 ~ 36552132 (-)
LOC110529236 plcb1 coding downstream 152582 36216234 ~ 36490738 (-)
LOC110529235 plcb4 coding downstream 436840 36063537 ~ 36206480 (-)
LOC110529870 LOC106571558 coding downstream 583949 36052936 ~ 36059371 (-)
trnaa-ugc-26 NA coding upstream 11829 36656565 ~ 36656638 (-)
gzf1 LOC106571746 coding upstream 29944 36674680 ~ 36682338 (-)
LOC110529879 LOC106571770 coding upstream 504587 37149323 ~ 37271260 (-)
LOC110529880 LOC106571768 coding upstream 710364 37355096 ~ 37361922 (-)
opn8a LOC106608050 coding upstream 781002 37425738 ~ 37456935 (-)
G703062 NA non-coding downstream 67336 36539491 ~ 36575984 (-)
G702295 NA non-coding downstream 157853 36483708 ~ 36485467 (-)
G702161 NA non-coding downstream 383496 36259368 ~ 36259824 (-)
G702149 NA non-coding downstream 409436 36229175 ~ 36233884 (-)
G702145 NA non-coding downstream 418531 36224432 ~ 36224789 (-)
G703147 NA non-coding upstream 65890 36710626 ~ 36710921 (-)
G703155 NA non-coding upstream 74360 36719096 ~ 36719296 (-)
G703179 LOC106571747 non-coding upstream 117469 36762205 ~ 36767971 (-)
G703198 NA non-coding upstream 134108 36778844 ~ 36779547 (-)
G703301 NA non-coding upstream 287300 36932036 ~ 36932240 (-)
G701618 LOC106571560 other downstream 725145 35900623 ~ 35918175 (-)
LOC110529865 LOC106571568 other downstream 938007 35633473 ~ 35705333 (-)
G701454 NA other downstream 1053443 35582998 ~ 35589877 (-)
ankef1a LOC106571587 other downstream 2619435 34017010 ~ 34029131 (-)
G699468 NA other downstream 2690964 33943022 ~ 33952356 (-)
LOC110530908 otof other upstream 844491 37474229 ~ 37626960 (-)
G704702 NA other upstream 1392989 38037725 ~ 38038346 (-)
G704874 NA other upstream 1668753 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 2574908 39219644 ~ 39226313 (-)

Expression


Co-expression Network